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The map label for this gene is 15897661

Identifier: 15897661

GI number: 15897661

Start: 644710

End: 646629

Strand: Direct

Name: 15897661

Synonym: SSO0761

Alternate gene names: NA

Gene position: 644710-646629 (Clockwise)

Preceding gene: 15897659

Following gene: 15897663

Centisome position: 21.55

GC content: 36.41

Gene sequence:

>1920_bases
TTGGTGAATAGGTTGGCATCTCTGGATAGGTTTAACAGAATATCGTTAATATATTCTGAACTAAAGGAATTAGGGATAAC
CAGAATTGAATATGAAGGACCGACAATAGCTGTGTATGTAAAGAAACCAGCACTGATAACAGAAAAGGGAGAAGTAATAA
AGAAAATTGCAAAGGATATTAAAAAGAGAATAGTAATAAAAGCCGACCCTTCAGTAAGGAAAGATAAGAAGGAAGCCGTT
GAAATAATAAAGAACCTTGTACCCGCCGAAGCTGAAATTGTAGATATAAAATTTGATGATGACTTAGGTGAGGTATTAAT
AAAGGCAAAGAAACCAGGATTAGTAATAGGAAAAGGTGGCTCATTACAGCAAAGAATATTTGCTGAAACCTTTTGGAAGG
CGGAAATAGTTAGAGAACCACCAATAAAATCTAGAACATATGATAGTATCTTAGAGCATATTTACAATGAGACTGAATAT
AGAGCTAAAATACTAAAGGTTTTTGGAGAAAGGATACACAGAGAGACGATATTTCAAGATAAGTACGTAAGAATTACGGC
ATTAGGAGGCTTTCTAGAAGTTGGTCGGTCTGCAGTATTAGTAGAAACTCCAGAAAGCAAAGTATTGCTAGATGTGGGAC
TTAACCCTAGCGCGAATATGTTTGGAGAGAAATTATTCCCTAAGCTTGACATTGACCAGTTGAAGATGGAGGAATTGGAT
GCTGTAGTTATCACACATGCACATTTAGATCATTGCGGAATGGTGCCTTTTCTATTTAAGTATGGATATGAAGGGCCAGT
ATACACTACTGTACCAACTAGGGATATAATGGCATTAATGCAATTAGACTCGCTTGACGTTGCAGAAAAAGAAGGCAAAC
CCATACCTTACTCCGCAAAAGAGGTAAGAAAGGAGTTATTACACACAATAACGTTAGATTATGGAGAAGTTACTGATATT
GCACCTGACATAAGATTAACATTCTACAACGCTGGCCACATATTGGGATCTGGGATGGCTCATTTACACATTGGAGATGG
AAAACATAACATAGTCTATACTGGTGACTTCAAATATGCAAAAACTAAACTGCTTGATAAGGCAAACACGGAATTTCCAA
GAGTTGACACGTTAATTATGGAAACTACTTATGGTGCACAAGATCAGCCAAATAGAGAGGAATCGGAATTAGAGTTGCTA
GAGATTATAAATAAAACACTTAATAAAGGAGGAAAAGTCCTAATTCCAGTACTAGCTGTAGGAAGAGGACAAGAAATTAT
GCTCATAATAAACGATTTTATGAAAAAGAAGCTAATTCCAGAGGTACCGGTTTACGTAACGGGATTAGTTGATGAAGTTA
CAGCTATACATAATGCGTATCCAGAGTGGTTAGGAAGAGAAGTGAGAGAAGAAATATTGTATAAAGATGAAAATCCGTTT
ACCTCAGAACACTTTAAGAGAATTGAAGGATATAAAGAGGATATAGCAAAAGGTGAGCCATCTATAATTTTAGCAACTTC
TGGAATGTTAAACGGAGGACCCGCTGTGGAATTCTTCAAGACCATGGCACCAGATCCTAAAAATGCAATAATATTTGTAA
GTTATCAAGCAGAAGGTACATTAGGTAGAAAAGTGAGAGACGGCGCAAAAGAAGTACAAATTCTTGATAGGGACGGAAGA
GTAGAGTCAATACAAATAAATATGGAAGTCGAGGCAGTTGAAGGGTTTTCTGGACACTCCGATAAAAGACAACTCCTTAA
CTTCCTTAGAAATATCGAACCTAAGCCCAAAAATGTAATATTAAATCACGGAGAAGCATCTTCAATAAGAGCTTTTGCAA
ACTATATAAGAGAAGATAGATTAGGGTATAAGCCCAATATATATACACCAGCTATATTGGATAGCCTAAGAGTAGCCTAA

Upstream 100 bases:

>100_bases
TAGACTAATCACGTGTTCTTTTACATTCACATATAAAAGGAGAAGATTTAAATATTAAAAATTAGCATAGATAAGTTCAG
TTGTAGCTATTTCTTAAAAG

Downstream 100 bases:

>100_bases
ATGCTTTATTAACCTATTGAATGTTTTTCCACTAAAGACTATATTATTTTCCTTTCAATAATGATCAATAATGATTAGAT
GCATAATTTCTTTTCTTCAC

Product: mRNA 3'-end processing factor, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MVNRLASLDRFNRISLIYSELKELGITRIEYEGPTIAVYVKKPALITEKGEVIKKIAKDIKKRIVIKADPSVRKDKKEAV
EIIKNLVPAEAEIVDIKFDDDLGEVLIKAKKPGLVIGKGGSLQQRIFAETFWKAEIVREPPIKSRTYDSILEHIYNETEY
RAKILKVFGERIHRETIFQDKYVRITALGGFLEVGRSAVLVETPESKVLLDVGLNPSANMFGEKLFPKLDIDQLKMEELD
AVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVAEKEGKPIPYSAKEVRKELLHTITLDYGEVTDI
APDIRLTFYNAGHILGSGMAHLHIGDGKHNIVYTGDFKYAKTKLLDKANTEFPRVDTLIMETTYGAQDQPNREESELELL
EIINKTLNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEWLGREVREEILYKDENPF
TSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAVEFFKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGR
VESIQINMEVEAVEGFSGHSDKRQLLNFLRNIEPKPKNVILNHGEASSIRAFANYIREDRLGYKPNIYTPAILDSLRVA

Sequences:

>Translated_639_residues
MVNRLASLDRFNRISLIYSELKELGITRIEYEGPTIAVYVKKPALITEKGEVIKKIAKDIKKRIVIKADPSVRKDKKEAV
EIIKNLVPAEAEIVDIKFDDDLGEVLIKAKKPGLVIGKGGSLQQRIFAETFWKAEIVREPPIKSRTYDSILEHIYNETEY
RAKILKVFGERIHRETIFQDKYVRITALGGFLEVGRSAVLVETPESKVLLDVGLNPSANMFGEKLFPKLDIDQLKMEELD
AVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVAEKEGKPIPYSAKEVRKELLHTITLDYGEVTDI
APDIRLTFYNAGHILGSGMAHLHIGDGKHNIVYTGDFKYAKTKLLDKANTEFPRVDTLIMETTYGAQDQPNREESELELL
EIINKTLNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEWLGREVREEILYKDENPF
TSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAVEFFKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGR
VESIQINMEVEAVEGFSGHSDKRQLLNFLRNIEPKPKNVILNHGEASSIRAFANYIREDRLGYKPNIYTPAILDSLRVA
>Mature_639_residues
MVNRLASLDRFNRISLIYSELKELGITRIEYEGPTIAVYVKKPALITEKGEVIKKIAKDIKKRIVIKADPSVRKDKKEAV
EIIKNLVPAEAEIVDIKFDDDLGEVLIKAKKPGLVIGKGGSLQQRIFAETFWKAEIVREPPIKSRTYDSILEHIYNETEY
RAKILKVFGERIHRETIFQDKYVRITALGGFLEVGRSAVLVETPESKVLLDVGLNPSANMFGEKLFPKLDIDQLKMEELD
AVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVAEKEGKPIPYSAKEVRKELLHTITLDYGEVTDI
APDIRLTFYNAGHILGSGMAHLHIGDGKHNIVYTGDFKYAKTKLLDKANTEFPRVDTLIMETTYGAQDQPNREESELELL
EIINKTLNKGGKVLIPVLAVGRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEWLGREVREEILYKDENPF
TSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAVEFFKTMAPDPKNAIIFVSYQAEGTLGRKVRDGAKEVQILDRDGR
VESIQINMEVEAVEGFSGHSDKRQLLNFLRNIEPKPKNVILNHGEASSIRAFANYIREDRLGYKPNIYTPAILDSLRVA

Specific function: Unknown

COG id: COG1782

COG function: function code R; Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33300633, Length=456, Percent_Identity=29.6052631578947, Blast_Score=225, Evalue=1e-58,
Organism=Homo sapiens, GI7706427, Length=440, Percent_Identity=30.9090909090909, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI34101288, Length=381, Percent_Identity=24.4094488188976, Blast_Score=107, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI32564696, Length=457, Percent_Identity=28.2275711159737, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI32566029, Length=428, Percent_Identity=31.0747663551402, Blast_Score=206, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17559452, Length=412, Percent_Identity=24.5145631067961, Blast_Score=97, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323307, Length=443, Percent_Identity=27.5395033860045, Blast_Score=174, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24648013, Length=432, Percent_Identity=31.9444444444444, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI21358523, Length=455, Percent_Identity=30.1098901098901, Blast_Score=230, Evalue=3e-60,
Organism=Drosophila melanogaster, GI21358013, Length=392, Percent_Identity=24.234693877551, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24650920, Length=270, Percent_Identity=24.8148148148148, Blast_Score=73, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022712
- InterPro:   IPR001279
- InterPro:   IPR004087
- InterPro:   IPR019975
- InterPro:   IPR004044
- InterPro:   IPR011108 [H]

Pfam domain/function: PF10996 Beta-Casp; PF07650 KH_2; PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 72060; Mature: 72060

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRLASLDRFNRISLIYSELKELGITRIEYEGPTIAVYVKKPALITEKGEVIKKIAKDI
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCEECCCHHHHHHHHHHH
KKRIVIKADPSVRKDKKEAVEIIKNLVPAEAEIVDIKFDDDLGEVLIKAKKPGLVIGKGG
HHCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHEEECCCCEEEECCC
SLQQRIFAETFWKAEIVREPPIKSRTYDSILEHIYNETEYRAKILKVFGERIHRETIFQD
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
KYVRITALGGFLEVGRSAVLVETPESKVLLDVGLNPSANMFGEKLFPKLDIDQLKMEELD
CEEEEEEECCHHHHCCCEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHC
AVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVAEKEGKPIPYSAK
EEEEEECHHCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCHHHCCCCCCCCHH
EVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSGMAHLHIGDGKHNIVYTGDFKYA
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHCCCEEEEEECCCCCEEEEECCCHHH
KTKLLDKANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINKTLNKGGKVLIPVLAV
HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC
GRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEWLGREVREEILYKDENPF
CCCCEEEEEHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
TSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAVEFFKTMAPDPKNAIIFVSYQAEGT
CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCC
LGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSGHSDKRQLLNFLRNIEPKPKNVI
CCHHHHCCCHHEEEECCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEE
LNHGEASSIRAFANYIREDRLGYKPNIYTPAILDSLRVA
EECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MVNRLASLDRFNRISLIYSELKELGITRIEYEGPTIAVYVKKPALITEKGEVIKKIAKDI
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCEECCCHHHHHHHHHHH
KKRIVIKADPSVRKDKKEAVEIIKNLVPAEAEIVDIKFDDDLGEVLIKAKKPGLVIGKGG
HHCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHEEECCCCEEEECCC
SLQQRIFAETFWKAEIVREPPIKSRTYDSILEHIYNETEYRAKILKVFGERIHRETIFQD
CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
KYVRITALGGFLEVGRSAVLVETPESKVLLDVGLNPSANMFGEKLFPKLDIDQLKMEELD
CEEEEEEECCHHHHCCCEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHC
AVVITHAHLDHCGMVPFLFKYGYEGPVYTTVPTRDIMALMQLDSLDVAEKEGKPIPYSAK
EEEEEECHHCCCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCHHHCCCCCCCCHH
EVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHILGSGMAHLHIGDGKHNIVYTGDFKYA
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHCCCEEEEEECCCCCEEEEECCCHHH
KTKLLDKANTEFPRVDTLIMETTYGAQDQPNREESELELLEIINKTLNKGGKVLIPVLAV
HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEC
GRGQEIMLIINDFMKKKLIPEVPVYVTGLVDEVTAIHNAYPEWLGREVREEILYKDENPF
CCCCEEEEEHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
TSEHFKRIEGYKEDIAKGEPSIILATSGMLNGGPAVEFFKTMAPDPKNAIIFVSYQAEGT
CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCC
LGRKVRDGAKEVQILDRDGRVESIQINMEVEAVEGFSGHSDKRQLLNFLRNIEPKPKNVI
CCHHHHCCCHHEEEECCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEE
LNHGEASSIRAFANYIREDRLGYKPNIYTPAILDSLRVA
EECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]