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The map label for this gene is rpl34e

Identifier: 15897598

GI number: 15897598

Start: 598477

End: 598743

Strand: Reverse

Name: rpl34e

Synonym: SSO6374

Alternate gene names: 15897598

Gene position: 598743-598477 (Counterclockwise)

Preceding gene: 15897599

Following gene: 15897597

Centisome position: 20.01

GC content: 37.83

Gene sequence:

>267_bases
ATGCCTAGACCAGCTTTACGCTCTAGGTCACTTAGGAGGGTTTATGTAAAGTTGCCAAGTGGAAAGACTGTTATACATTA
TGAAAGAAAGAGAAACGATATTGCGATATGCGCTATATGTAAGAAACCTTTACATGGTGTAAAAACTAACTTTTTGCATA
AATATAGTAAGTCAGAGAAGAGACCAGAAAGGCCTTTTGGCGGATACTTGTGCTCATCTTGCCTTACTCAACTAATCAAA
GCTACTGTAAGGCAACAACTTCAATGA

Upstream 100 bases:

>100_bases
ATGCTCAACGGGTCTCTCTTTGAGTTTATAGCATCTTATATCTTATTTACCCCTCTATCTTTAAGATCAAATTTAAAAAC
AAGATAGGATAGATTAAGAT

Downstream 100 bases:

>100_bases
GATAATTTTATAATTTTTAATTTTAATGAGGAAGAAATTGGATGATAATTATAATAAGCGGTCCTCCAGGTAGTGGTAAG
ACCTCAGTTGCAATAAAGCT

Product: 50S ribosomal protein L34e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MPRPALRSRSLRRVYVKLPSGKTVIHYERKRNDIAICAICKKPLHGVKTNFLHKYSKSEKRPERPFGGYLCSSCLTQLIK
ATVRQQLQ

Sequences:

>Translated_88_residues
MPRPALRSRSLRRVYVKLPSGKTVIHYERKRNDIAICAICKKPLHGVKTNFLHKYSKSEKRPERPFGGYLCSSCLTQLIK
ATVRQQLQ
>Mature_87_residues
PRPALRSRSLRRVYVKLPSGKTVIHYERKRNDIAICAICKKPLHGVKTNFLHKYSKSEKRPERPFGGYLCSSCLTQLIKA
TVRQQLQ

Specific function: Unknown

COG id: COG2174

COG function: function code J; Ribosomal protein L34E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_SULSO (Q97ZQ6)

Other databases:

- EMBL:   AE006641
- PIR:   B90217
- RefSeq:   NP_342203.1
- ProteinModelPortal:   Q97ZQ6
- GeneID:   1454960
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO6374
- NMPDR:   fig|273057.1.peg.626
- HOGENOM:   HBG553083
- OMA:   RRKYVRT
- ProtClustDB:   PRK04059
- BioCyc:   SSOL273057:SSO6374-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00349
- InterPro:   IPR008195
- InterPro:   IPR018065
- PRINTS:   PR01250

Pfam domain/function: PF01199 Ribosomal_L34e

EC number: NA

Molecular weight: Translated: 10196; Mature: 10065

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: PS01145 RIBOSOMAL_L34E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPALRSRSLRRVYVKLPSGKTVIHYERKRNDIAICAICKKPLHGVKTNFLHKYSKSEK
CCCCCCHHCCCEEEEEECCCCCEEEEEECCCCCEEEHHHHHCCCCHHHHHHHHHHHHCCC
RPERPFGGYLCSSCLTQLIKATVRQQLQ
CCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRPALRSRSLRRVYVKLPSGKTVIHYERKRNDIAICAICKKPLHGVKTNFLHKYSKSEK
CCCCCHHCCCEEEEEECCCCCEEEEEECCCCCEEEHHHHHCCCCHHHHHHHHHHHHCCC
RPERPFGGYLCSSCLTQLIKATVRQQLQ
CCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726