| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15897592
Identifier: 15897592
GI number: 15897592
Start: 591723
End: 594278
Strand: Reverse
Name: 15897592
Synonym: SSO0687
Alternate gene names: NA
Gene position: 594278-591723 (Counterclockwise)
Preceding gene: 15897593
Following gene: 15897591
Centisome position: 19.86
GC content: 33.88
Gene sequence:
>2556_bases ATGAGTAAAATATTCTCCATTATTACTATATCACTATTTTTAGTGTCGTTGTTATTTATTCCATTAACATCCTCTGCCAC ACAATCGTCTTTTTCAGCATCTTCACAATGGCTTTCTTCTACACCTTATGTAACTCCGGGGGAAAGATTAGTACAGTTAC AAGTAAATTTAGTATATCACGGAAATGGGAATATAACAAATGTGGAAATTTCTCCAATAGAAAGTGGTCCTTTTATAGTT TATCCGTCTACACAAACATACATTCTTCCCTCAATGTTTCCCAATCAACAATATTCACTTGTATTCATTGGAAATATTAC ACCTAATATACCTTTAGGTGTATATAATTTCTATCTGCAAGCAACATATCTAGAAAACGGAGCAGAGCAATCGCAGATAA TTACAGTGCAAATTCCTATTCTTGGATATGTACAACTTTCTGCAATAGCTCAAACTAGCGGTACAGTATTTCCAGGTGAA CAGTACGTTCCAATAAATTTAGTAATATACAACACTGGAACTGTTACTGCCAATAACGTAGCCTTGTTCTTAAACTCAAC ATATCCATTACAATTCATAACTAAAGAGATAAATATACCAATTATTAGCGCTGGTTCCTCACTTAATGTTCAAGCAATAG CAAATATTTATAATAATGCGACAATTGGTACATATAAAATACCACTTACAGCCTTCGTATATGGCACATATCATTCGCTT AATGTGACAATTACAATTAACAGTAATCAGACTGTTGGAGGGAAGCTAATAACTCCTTACGTTATCTTACCTGCTGGTTC ATATCAATTAGGAGTTCCAATAACTCTTCAGTTAATTTATACCGGTCCCATTTCAGTAAGTAGCTATTCAATTCAACTTA TTTTACCAAATGGCTTTACTAATATAACTGGTGGAAATTCTGTTTACATCAATGGGGGACCACTGCAACCTTATGAGGAG TTCACGGTATCTTTTACTATTAATATTCGTAATGTATCTTTAGGTGCATATACAATTCCTTTAAAGATAATTTGGAGCAC TATAGAAGGTAACGGCGTAGTTGTAAATACATTACAGTATATGTCATTTACTATGTTCCTTATGGGTCAACCGAATATAG AAGTTTACCCTGAAACCTCTTTATTATATCCAGGAGAAGTTAACAATATTACTCTAGTTATATTAAATCTAGGATCTGGA AGTATATACAATCTATCCCTTTCCGTTTCCTCTCAACAAGTATCCATCCTTAATAACTTGCCTAAAATTCAATCACTATC TCCAACTCAATCGGTTAAAATACCTTTAGAAGTTTATGTTCCATCTACTTATCAAGGAGCTCCTGTACAGTTCACTATTT CAATATCGTATTTAAATTCAGTTTATCAACAGTCGCAGTATCAACAACAGATAGGCCTTTACGTTTCTCCTCTAATTTCA CCAAATACCCCTATTATCGCCTCTTTAAACCCAGGGATAATTTCACCAAATTCGTTTACAACTACGTATCTTGTATTGAC AAACTCGTTAAATACTACCCTTTACAATCTATCAATTACCCTTTCGTCACCAGTTTACGTTAATGCTACAGCGTTTAATT TACCGTCTCTCAAACCTACTTCTAAATACGAATTACCTATAACTGTTTACGCACAAGGCTCTGGGAGTTATTCTATCTCA ATATCGATTGTTTATTACCAAGGTAATATAGAAAGACAAGAGCAAATTACAGTTCCAGTTTACGTTATACAGATCAATTC ACCAACTATACCAATTTTAATTCAATTCAATTCTTCTACATTACTAACTGGTCAAGTAGAGGATGCAACGATCATAATAC AAAACACAGTAAATCAACCATTGTATAACGTTACCATATCATTAGCCTCTCAAGGAACACTTTATATTAATACAACGACA ATAACTCTACCCTCGCTTCAACCTTTGCAAAGATTAGATATTCCCGTCAAAGTATATACTCAGAGCGCTGGAATAATTAG TATAAGCGCTAGTATATCGTATTATCAGGCTGGACAATTAAAGCAAGCTCAAGAAGTTATTAATAGTCTAGCTGCAGGTT CAGTTAACATTATAATAACTGGTGTTTCCTCAGTTCCTACGGTTGCAGTAAGAGGTGGCATAGTTTCAGTTACAGCGACC ATCTATAATTTTGGTACTGGTCCTGCTAACGGTCTCACAGTTACGGTATTTCCACCTAGAGGCGTTGTGGTAATAGGTCA AAACACTTATTATGTAGGTAATTTAGGTTCGGATACCTCATCAACATTTACCTTTGCATTTAGAATACTTAACTCCACTA AGCCAGGTTCTTATGTTATTCCTATAGAGTATACTTATACTAATGACATTGGACAAGTTATACACTCAAATTCAAGTATC ACACTACAAGTCTCAAATAGTTCTTCTAGTTTCTTCATCTCGTTCTCAAGAAGTAGTAATAATTCTCACATATCTCTAAT TGACATATTAGGTATAATAATTGTAATAATCGTAGTTGTAGTCTTAGTGATAGTATTATTAAGAAAAAGAAGGTGA
Upstream 100 bases:
>100_bases GTAACTATTATAATGGCTACTCACGACCCAGATATGATGAGATATGCGGATAGGATCGTATATATTAGAGATGGATTAGT TGAAAAAGAGGTGATACAGA
Downstream 100 bases:
>100_bases TTAATAGTGAATTCATTAGATATTTTATGGCTAGCATATAAGGGGTTAGTATCTAGGAAAGCGATAGCGATTTTAGCTAT AATATCAGTGATGATAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 851; Mature: 850
Protein sequence:
>851_residues MSKIFSIITISLFLVSLLFIPLTSSATQSSFSASSQWLSSTPYVTPGERLVQLQVNLVYHGNGNITNVEISPIESGPFIV YPSTQTYILPSMFPNQQYSLVFIGNITPNIPLGVYNFYLQATYLENGAEQSQIITVQIPILGYVQLSAIAQTSGTVFPGE QYVPINLVIYNTGTVTANNVALFLNSTYPLQFITKEINIPIISAGSSLNVQAIANIYNNATIGTYKIPLTAFVYGTYHSL NVTITINSNQTVGGKLITPYVILPAGSYQLGVPITLQLIYTGPISVSSYSIQLILPNGFTNITGGNSVYINGGPLQPYEE FTVSFTINIRNVSLGAYTIPLKIIWSTIEGNGVVVNTLQYMSFTMFLMGQPNIEVYPETSLLYPGEVNNITLVILNLGSG SIYNLSLSVSSQQVSILNNLPKIQSLSPTQSVKIPLEVYVPSTYQGAPVQFTISISYLNSVYQQSQYQQQIGLYVSPLIS PNTPIIASLNPGIISPNSFTTTYLVLTNSLNTTLYNLSITLSSPVYVNATAFNLPSLKPTSKYELPITVYAQGSGSYSIS ISIVYYQGNIERQEQITVPVYVIQINSPTIPILIQFNSSTLLTGQVEDATIIIQNTVNQPLYNVTISLASQGTLYINTTT ITLPSLQPLQRLDIPVKVYTQSAGIISISASISYYQAGQLKQAQEVINSLAAGSVNIIITGVSSVPTVAVRGGIVSVTAT IYNFGTGPANGLTVTVFPPRGVVVIGQNTYYVGNLGSDTSSTFTFAFRILNSTKPGSYVIPIEYTYTNDIGQVIHSNSSI TLQVSNSSSSFFISFSRSSNNSHISLIDILGIIIVIIVVVVLVIVLLRKRR
Sequences:
>Translated_851_residues MSKIFSIITISLFLVSLLFIPLTSSATQSSFSASSQWLSSTPYVTPGERLVQLQVNLVYHGNGNITNVEISPIESGPFIV YPSTQTYILPSMFPNQQYSLVFIGNITPNIPLGVYNFYLQATYLENGAEQSQIITVQIPILGYVQLSAIAQTSGTVFPGE QYVPINLVIYNTGTVTANNVALFLNSTYPLQFITKEINIPIISAGSSLNVQAIANIYNNATIGTYKIPLTAFVYGTYHSL NVTITINSNQTVGGKLITPYVILPAGSYQLGVPITLQLIYTGPISVSSYSIQLILPNGFTNITGGNSVYINGGPLQPYEE FTVSFTINIRNVSLGAYTIPLKIIWSTIEGNGVVVNTLQYMSFTMFLMGQPNIEVYPETSLLYPGEVNNITLVILNLGSG SIYNLSLSVSSQQVSILNNLPKIQSLSPTQSVKIPLEVYVPSTYQGAPVQFTISISYLNSVYQQSQYQQQIGLYVSPLIS PNTPIIASLNPGIISPNSFTTTYLVLTNSLNTTLYNLSITLSSPVYVNATAFNLPSLKPTSKYELPITVYAQGSGSYSIS ISIVYYQGNIERQEQITVPVYVIQINSPTIPILIQFNSSTLLTGQVEDATIIIQNTVNQPLYNVTISLASQGTLYINTTT ITLPSLQPLQRLDIPVKVYTQSAGIISISASISYYQAGQLKQAQEVINSLAAGSVNIIITGVSSVPTVAVRGGIVSVTAT IYNFGTGPANGLTVTVFPPRGVVVIGQNTYYVGNLGSDTSSTFTFAFRILNSTKPGSYVIPIEYTYTNDIGQVIHSNSSI TLQVSNSSSSFFISFSRSSNNSHISLIDILGIIIVIIVVVVLVIVLLRKRR >Mature_850_residues SKIFSIITISLFLVSLLFIPLTSSATQSSFSASSQWLSSTPYVTPGERLVQLQVNLVYHGNGNITNVEISPIESGPFIVY PSTQTYILPSMFPNQQYSLVFIGNITPNIPLGVYNFYLQATYLENGAEQSQIITVQIPILGYVQLSAIAQTSGTVFPGEQ YVPINLVIYNTGTVTANNVALFLNSTYPLQFITKEINIPIISAGSSLNVQAIANIYNNATIGTYKIPLTAFVYGTYHSLN VTITINSNQTVGGKLITPYVILPAGSYQLGVPITLQLIYTGPISVSSYSIQLILPNGFTNITGGNSVYINGGPLQPYEEF TVSFTINIRNVSLGAYTIPLKIIWSTIEGNGVVVNTLQYMSFTMFLMGQPNIEVYPETSLLYPGEVNNITLVILNLGSGS IYNLSLSVSSQQVSILNNLPKIQSLSPTQSVKIPLEVYVPSTYQGAPVQFTISISYLNSVYQQSQYQQQIGLYVSPLISP NTPIIASLNPGIISPNSFTTTYLVLTNSLNTTLYNLSITLSSPVYVNATAFNLPSLKPTSKYELPITVYAQGSGSYSISI SIVYYQGNIERQEQITVPVYVIQINSPTIPILIQFNSSTLLTGQVEDATIIIQNTVNQPLYNVTISLASQGTLYINTTTI TLPSLQPLQRLDIPVKVYTQSAGIISISASISYYQAGQLKQAQEVINSLAAGSVNIIITGVSSVPTVAVRGGIVSVTATI YNFGTGPANGLTVTVFPPRGVVVIGQNTYYVGNLGSDTSSTFTFAFRILNSTKPGSYVIPIEYTYTNDIGQVIHSNSSIT LQVSNSSSSFFISFSRSSNNSHISLIDILGIIIVIIVVVVLVIVLLRKRR
Specific function: Unknown
COG id: COG1361
COG function: function code M; S-layer domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92114; Mature: 91983
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIFSIITISLFLVSLLFIPLTSSATQSSFSASSQWLSSTPYVTPGERLVQLQVNLVYH CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEEEEE GNGNITNVEISPIESGPFIVYPSTQTYILPSMFPNQQYSLVFIGNITPNIPLGVYNFYLQ CCCCEEEEEEEECCCCCEEEECCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEE ATYLENGAEQSQIITVQIPILGYVQLSAIAQTSGTVFPGEQYVPINLVIYNTGTVTANNV EEEECCCCCCCEEEEEEECEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEECCEEEECCE ALFLNSTYPLQFITKEINIPIISAGSSLNVQAIANIYNNATIGTYKIPLTAFVYGTYHSL EEEEECCCCEEEEEEECCEEEEECCCCCCEEEEEEHHCCCEEEEEEEEEEEEEEEEEEEE NVTITINSNQTVGGKLITPYVILPAGSYQLGVPITLQLIYTGPISVSSYSIQLILPNGFT EEEEEECCCCCCCCEEECCEEEEECCCEEECCCEEEEEEEECCEEEEEEEEEEEECCCCC NITGGNSVYINGGPLQPYEEFTVSFTINIRNVSLGAYTIPLKIIWSTIEGNGVVVNTLQY CCCCCCEEEECCCCCCCCCEEEEEEEEEEEEEEECEEEEEEEEEEEEECCCCEEEEEEHH MSFTMFLMGQPNIEVYPETSLLYPGEVNNITLVILNLGSGSIYNLSLSVSSQQVSILNNL EEEEEEEECCCCEEEECCCEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEHHHHCC PKIQSLSPTQSVKIPLEVYVPSTYQGAPVQFTISISYLNSVYQQSQYQQQIGLYVSPLIS CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEEEEECCC PNTPIIASLNPGIISPNSFTTTYLVLTNSLNTTLYNLSITLSSPVYVNATAFNLPSLKPT CCCCEEEECCCCEECCCCCEEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEECCCCCCC SKYELPITVYAQGSGSYSISISIVYYQGNIERQEQITVPVYVIQINSPTIPILIQFNSST CCEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCEEEEEEECCCE LLTGQVEDATIIIQNTVNQPLYNVTISLASQGTLYINTTTITLPSLQPLQRLDIPVKVYT EEEEECCCEEEEEEECCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCHHHCCCCEEEEE QSAGIISISASISYYQAGQLKQAQEVINSLAAGSVNIIITGVSSVPTVAVRGGIVSVTAT ECCCEEEEEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCEEEEEEE IYNFGTGPANGLTVTVFPPRGVVVIGQNTYYVGNLGSDTSSTFTFAFRILNSTKPGSYVI EEECCCCCCCCEEEEEECCCCEEEECCCEEEEEECCCCCCCEEEEEEEEECCCCCCCEEE PIEYTYTNDIGQVIHSNSSITLQVSNSSSSFFISFSRSSNNSHISLIDILGIIIVIIVVV EEEEEECCCHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHH VLVIVLLRKRR HHHHHHHHCCC >Mature Secondary Structure SKIFSIITISLFLVSLLFIPLTSSATQSSFSASSQWLSSTPYVTPGERLVQLQVNLVYH CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEEEEE GNGNITNVEISPIESGPFIVYPSTQTYILPSMFPNQQYSLVFIGNITPNIPLGVYNFYLQ CCCCEEEEEEEECCCCCEEEECCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEE ATYLENGAEQSQIITVQIPILGYVQLSAIAQTSGTVFPGEQYVPINLVIYNTGTVTANNV EEEECCCCCCCEEEEEEECEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEECCEEEECCE ALFLNSTYPLQFITKEINIPIISAGSSLNVQAIANIYNNATIGTYKIPLTAFVYGTYHSL EEEEECCCCEEEEEEECCEEEEECCCCCCEEEEEEHHCCCEEEEEEEEEEEEEEEEEEEE NVTITINSNQTVGGKLITPYVILPAGSYQLGVPITLQLIYTGPISVSSYSIQLILPNGFT EEEEEECCCCCCCCEEECCEEEEECCCEEECCCEEEEEEEECCEEEEEEEEEEEECCCCC NITGGNSVYINGGPLQPYEEFTVSFTINIRNVSLGAYTIPLKIIWSTIEGNGVVVNTLQY CCCCCCEEEECCCCCCCCCEEEEEEEEEEEEEEECEEEEEEEEEEEEECCCCEEEEEEHH MSFTMFLMGQPNIEVYPETSLLYPGEVNNITLVILNLGSGSIYNLSLSVSSQQVSILNNL EEEEEEEECCCCEEEECCCEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCEEHHHHCC PKIQSLSPTQSVKIPLEVYVPSTYQGAPVQFTISISYLNSVYQQSQYQQQIGLYVSPLIS CCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEEEEECCC PNTPIIASLNPGIISPNSFTTTYLVLTNSLNTTLYNLSITLSSPVYVNATAFNLPSLKPT CCCCEEEECCCCEECCCCCEEEEEEEEECCCEEEEEEEEEECCCEEEEEEEEECCCCCCC SKYELPITVYAQGSGSYSISISIVYYQGNIERQEQITVPVYVIQINSPTIPILIQFNSST CCEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCEEEEEEECCCE LLTGQVEDATIIIQNTVNQPLYNVTISLASQGTLYINTTTITLPSLQPLQRLDIPVKVYT EEEEECCCEEEEEEECCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCHHHCCCCEEEEE QSAGIISISASISYYQAGQLKQAQEVINSLAAGSVNIIITGVSSVPTVAVRGGIVSVTAT ECCCEEEEEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCEEEEEEE IYNFGTGPANGLTVTVFPPRGVVVIGQNTYYVGNLGSDTSSTFTFAFRILNSTKPGSYVI EEECCCCCCCCEEEEEECCCCEEEECCCEEEEEECCCCCCCEEEEEEEEECCCCCCCEEE PIEYTYTNDIGQVIHSNSSITLQVSNSSSSFFISFSRSSNNSHISLIDILGIIIVIIVVV EEEEEECCCHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHH VLVIVLLRKRR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA