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The map label for this gene is 15897556

Identifier: 15897556

GI number: 15897556

Start: 559954

End: 560547

Strand: Reverse

Name: 15897556

Synonym: SSO0646

Alternate gene names: NA

Gene position: 560547-559954 (Counterclockwise)

Preceding gene: 15897558

Following gene: 15897541

Centisome position: 18.73

GC content: 33.67

Gene sequence:

>594_bases
ATGCTTGTTGAGAAAATTAAAGGTTATCTTAATTCAATTAGTGGTGTACTTCAAGAAAGATTTGAGAATAGAGAAAGAGT
ATTGATGCTAGCTAGAGAATTAATAAGATATTGCGGGGAGACAATTTCATTATCTCACAAGGGTAAAAAAGAAGAGGCAT
TAAAAAAGTATCAGATTGCAATTTCTAAAGTATCTGAAATTCAAAAGATTATAGATAGTTTCCCAGAACTTTTATATGGC
GATGTAGGAACTGCGTATCAAGAACTAGCTGAGGCTTCTATAGTGATTTCATTGTACTTTGATGTTGAGTTAAAGCTCTC
TAAGGAACTCGGTATTCCAGACATATACTATATAAGTGGAATAGCAGACGCGATAGGTGAGATGAGAAGAAGAGTATTGG
AGTTACTTAAGAAAAATAAAATAGATGAAGCCGAAAATACATATAATATAATGGAAGAGTTATATGAACTTCTATGGAGT
TTCGAGTACCCTAAATCCTTGGTCCCTGGACTAAGACAAAAGATTGATACCATAAGAAGACTATTAGAGGAGACTAATCA
CGATATTTTTCTGGCTAAGCTCGGTAGGTCTTAA

Upstream 100 bases:

>100_bases
TACCTTATTAATTGATTTCATATGTATAAACATGTTTAAGAAGTATAAGTAAATTTCTATTAATGGATAGAGTTAAAAGT
GCGGATATAGTGGAATTACT

Downstream 100 bases:

>100_bases
CGATGTGATCTACTAGCTTTTCGGCAACATTGATACCAGTAGCTAGCATAAATCCTTTAAATTCTGGAACATCATTTAGC
TCATTTATAACATATCCTTT

Product: haloacid dehalogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLVEKIKGYLNSISGVLQERFENRERVLMLARELIRYCGETISLSHKGKKEEALKKYQIAISKVSEIQKIIDSFPELLYG
DVGTAYQELAEASIVISLYFDVELKLSKELGIPDIYYISGIADAIGEMRRRVLELLKKNKIDEAENTYNIMEELYELLWS
FEYPKSLVPGLRQKIDTIRRLLEETNHDIFLAKLGRS

Sequences:

>Translated_197_residues
MLVEKIKGYLNSISGVLQERFENRERVLMLARELIRYCGETISLSHKGKKEEALKKYQIAISKVSEIQKIIDSFPELLYG
DVGTAYQELAEASIVISLYFDVELKLSKELGIPDIYYISGIADAIGEMRRRVLELLKKNKIDEAENTYNIMEELYELLWS
FEYPKSLVPGLRQKIDTIRRLLEETNHDIFLAKLGRS
>Mature_197_residues
MLVEKIKGYLNSISGVLQERFENRERVLMLARELIRYCGETISLSHKGKKEEALKKYQIAISKVSEIQKIIDSFPELLYG
DVGTAYQELAEASIVISLYFDVELKLSKELGIPDIYYISGIADAIGEMRRRVLELLKKNKIDEAENTYNIMEELYELLWS
FEYPKSLVPGLRQKIDTIRRLLEETNHDIFLAKLGRS

Specific function: Unknown

COG id: COG2178

COG function: function code J; Predicted RNA-binding protein of the translin family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002848
- InterPro:   IPR016069
- InterPro:   IPR016068 [H]

Pfam domain/function: PF01997 Translin [H]

EC number: NA

Molecular weight: Translated: 22811; Mature: 22811

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVEKIKGYLNSISGVLQERFENRERVLMLARELIRYCGETISLSHKGKKEEALKKYQIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHH
ISKVSEIQKIIDSFPELLYGDVGTAYQELAEASIVISLYFDVELKLSKELGIPDIYYISG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEHHEEEEHHHCCCCHHHHHHH
IADAIGEMRRRVLELLKKNKIDEAENTYNIMEELYELLWSFEYPKSLVPGLRQKIDTIRR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLEETNHDIFLAKLGRS
HHHHCCCCEEEEECCCC
>Mature Secondary Structure
MLVEKIKGYLNSISGVLQERFENRERVLMLARELIRYCGETISLSHKGKKEEALKKYQIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHH
ISKVSEIQKIIDSFPELLYGDVGTAYQELAEASIVISLYFDVELKLSKELGIPDIYYISG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEHHEEEEHHHCCCCHHHHHHH
IADAIGEMRRRVLELLKKNKIDEAENTYNIMEELYELLWSFEYPKSLVPGLRQKIDTIRR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LLEETNHDIFLAKLGRS
HHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]