Click here to switch to the map view.

The map label for this gene is 15897476

Identifier: 15897476

GI number: 15897476

Start: 489285

End: 489770

Strand: Reverse

Name: 15897476

Synonym: SSO0554

Alternate gene names: NA

Gene position: 489770-489285 (Counterclockwise)

Preceding gene: 15897477

Following gene: 15897475

Centisome position: 16.37

GC content: 35.6

Gene sequence:

>486_bases
TTGAGTTACGTACCACATGTTCCTTATGTACCAACACCAGAAAAAGTTGTAAGAAGAATGTTAGAAATAGCTAAAGCCTC
TCAAGATGATATAGTGTATGACTTAGGATGTGGAGATGGAAGGATAATAATAACTGCAGTGAAGGATTTTAACGTAAAGA
AGGCCATAGGTGTAGAGATCAATGATGAAAGAATAAGAGAAGCATTAGCTAATATCGAGAAAAATGGGGTAACGGGAAGA
GCTTCAATAGTAAAAGGTAATTTCTTTGAGGTTGATATTTCCGAGGCTACTGTAGTTACGATGTTCCTTTTAACAAATGT
TAATGAGATGTTAAAACCAAAACTTGAAAAGGAACTTAAACCTGGAACGAGAGTGGTTTCCCACGAATTTGAAATAAGGG
GTTGGAATCCAAAGGAAGTAGTAAAGGTTGAGGACGGAAATATGAATCATACAGTATATCTCTACGTAATTGGTGAACAT
AAATGA

Upstream 100 bases:

>100_bases
CGACGCTAGCCTAAAGCCAGATAAGAAAGCTGGAAAAGAAGAGGCTATTAAAAAAATTAAAAACCTAGGATAAGATAGGA
TTATTTTGAAGTGAGAAGTT

Downstream 100 bases:

>100_bases
AAATTTTGATAGTAAAAAGTGAGAATGGAAAGGTGACATCGGAGAAGGTAGCTGAAGGCGAAATTAGCAAAGTGCTAAGA
GATGTTGCAAAAGAAGCGTT

Product: ribosomal protein L11 methyltransferase, putative

Products: NA

Alternate protein names: Methyltransferase Type; Histone Methylation DOT1 Family Protein; rRNA Methylase Family Protein; Ribosomal Methyltransferase; Methyltransferase; RNA Methylase Family UPF; Ribosomal Methylase-Like Protein; RNA Methylase Family; SAM-Dependent Methyltransferase; Cyclopropane Fatty Acid Synthase-Like Protein; Methylase

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSYVPHVPYVPTPEKVVRRMLEIAKASQDDIVYDLGCGDGRIIITAVKDFNVKKAIGVEINDERIREALANIEKNGVTGR
ASIVKGNFFEVDISEATVVTMFLLTNVNEMLKPKLEKELKPGTRVVSHEFEIRGWNPKEVVKVEDGNMNHTVYLYVIGEH
K

Sequences:

>Translated_161_residues
MSYVPHVPYVPTPEKVVRRMLEIAKASQDDIVYDLGCGDGRIIITAVKDFNVKKAIGVEINDERIREALANIEKNGVTGR
ASIVKGNFFEVDISEATVVTMFLLTNVNEMLKPKLEKELKPGTRVVSHEFEIRGWNPKEVVKVEDGNMNHTVYLYVIGEH
K
>Mature_160_residues
SYVPHVPYVPTPEKVVRRMLEIAKASQDDIVYDLGCGDGRIIITAVKDFNVKKAIGVEINDERIREALANIEKNGVTGRA
SIVKGNFFEVDISEATVVTMFLLTNVNEMLKPKLEKELKPGTRVVSHEFEIRGWNPKEVVKVEDGNMNHTVYLYVIGEHK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI13027600, Length=136, Percent_Identity=30.8823529411765, Blast_Score=71, Evalue=4e-13,
Organism=Homo sapiens, GI154240720, Length=149, Percent_Identity=28.8590604026846, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18154; Mature: 18023

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVPHVPYVPTPEKVVRRMLEIAKASQDDIVYDLGCGDGRIIITAVKDFNVKKAIGVEI
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECEE
NDERIREALANIEKNGVTGRASIVKGNFFEVDISEATVVTMFLLTNVNEMLKPKLEKELK
CHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCC
PGTRVVSHEFEIRGWNPKEVVKVEDGNMNHTVYLYVIGEHK
CCCEEEEEEEEEECCCHHHEEEEECCCCCCEEEEEEEECCC
>Mature Secondary Structure 
SYVPHVPYVPTPEKVVRRMLEIAKASQDDIVYDLGCGDGRIIITAVKDFNVKKAIGVEI
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECEE
NDERIREALANIEKNGVTGRASIVKGNFFEVDISEATVVTMFLLTNVNEMLKPKLEKELK
CHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCC
PGTRVVSHEFEIRGWNPKEVVKVEDGNMNHTVYLYVIGEHK
CCCEEEEEEEEEECCCHHHEEEEECCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA