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The map label for this gene is pqqE-1 [H]

Identifier: 15897469

GI number: 15897469

Start: 477077

End: 478162

Strand: Direct

Name: pqqE-1 [H]

Synonym: SSO0546

Alternate gene names: 15897469

Gene position: 477077-478162 (Clockwise)

Preceding gene: 15897465

Following gene: 15897470

Centisome position: 15.94

GC content: 31.12

Gene sequence:

>1086_bases
TTGATAAATCGTAAACCTTTTTTTATTGAATTAGAATTAACTTATAAATGTAGTCAGCAATGCATTTATTGTCATAATCC
ACCTAAAGATCTAAAATTTTATATAGCTGATAAAGTTCCAAAACCTAGATCTGTAATAGAAATGAATGAGCTAAACTTAA
GTGAGTGGATATCAGTAATTAATCAAATTAAAAGGTTAGATGAAAAATACGAGGGAATCATGGATGTTGTGATAACTGGA
GGAGAACCGTTGTTAAGAAGCGATTTAGAGGAAATCTTGTCATATGTTACAAGACAAAAACTAAGGCACATGTTATTAAG
TAGCGGAGAACCTATTTCCGATGATAGAATTACAAAATTGCTAGAAAGTGGTCTAGAAAAGATTAGAATTAACCTTACTT
CACATAAATACGTCTTTAATATACAATCCCCAATAATGCATATCAAGAACGAAGTAGCTAAGAAGATTAATATCGCAAAG
AAATTTAAAGATTTTGGAGTAAAGGAAGTTGGAGGCAATATAGTCTTGACTAGTTATTATTTGGACTTCTTAGAAGAAAT
TGCGGAACTTGCATATAAATCAAACTTAGATTGGATTGAAATTCATAGTGTTATAAAGGTAGGTCATGGTTATATAAACC
AAAAGTTCATAGTACCAGATCCTAACGATGAAAGAACAATTCAAGAAAAATTAAAGAGACTCATAGAAATTTATGGGGAG
AATTTTATACAAAATTATGTGGATACTGACATTTTATATTCTAGGATACCAATCCCTACAAATTGGGGGGAAGTAGGTTT
AGTTATAGCTCCGAACGGTGACATTTATCCTAGTTCCGAGGCGACATCTATCCCATTATCAAAGCTAGGTAATATAAAAA
ACGACTCATTAGTTGAAATTTGGTTTAACAATCTCTTGCTTAATAAAATAAGAAGTCTATCTTTCCTTAGAGAGCCTTGT
AAGAGTTGTGAAGTTAAGAAGCTTTGTAGAGGTGGTTTTAGGTTTAATGCATATATAACTAAGAATGACCTATTTGCTCC
AGACCCTTCATGTCAAATAGTTAAAGATTATATTGGAAAAAGTTAA

Upstream 100 bases:

>100_bases
CGAAGAAAATATATGATGTACTATACAATACATCCACCTTCATACTACATGGTTTCTTGGTAATCTTGTAATATATTCTA
AGATAGTGAGGGTGAAATAG

Downstream 100 bases:

>100_bases
AGAAGAGGTCTATTAGTTATGGGTCTGAAGCAAACACTAAAAGAGATCTATTACATTGTAGCAGATAAGAGACTGCTCTA
TTTTTCATTATCTTTGGGGA

Product: coenzyme PQQ synthesis protein E (pqqE-1)

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MINRKPFFIELELTYKCSQQCIYCHNPPKDLKFYIADKVPKPRSVIEMNELNLSEWISVINQIKRLDEKYEGIMDVVITG
GEPLLRSDLEEILSYVTRQKLRHMLLSSGEPISDDRITKLLESGLEKIRINLTSHKYVFNIQSPIMHIKNEVAKKINIAK
KFKDFGVKEVGGNIVLTSYYLDFLEEIAELAYKSNLDWIEIHSVIKVGHGYINQKFIVPDPNDERTIQEKLKRLIEIYGE
NFIQNYVDTDILYSRIPIPTNWGEVGLVIAPNGDIYPSSEATSIPLSKLGNIKNDSLVEIWFNNLLLNKIRSLSFLREPC
KSCEVKKLCRGGFRFNAYITKNDLFAPDPSCQIVKDYIGKS

Sequences:

>Translated_361_residues
MINRKPFFIELELTYKCSQQCIYCHNPPKDLKFYIADKVPKPRSVIEMNELNLSEWISVINQIKRLDEKYEGIMDVVITG
GEPLLRSDLEEILSYVTRQKLRHMLLSSGEPISDDRITKLLESGLEKIRINLTSHKYVFNIQSPIMHIKNEVAKKINIAK
KFKDFGVKEVGGNIVLTSYYLDFLEEIAELAYKSNLDWIEIHSVIKVGHGYINQKFIVPDPNDERTIQEKLKRLIEIYGE
NFIQNYVDTDILYSRIPIPTNWGEVGLVIAPNGDIYPSSEATSIPLSKLGNIKNDSLVEIWFNNLLLNKIRSLSFLREPC
KSCEVKKLCRGGFRFNAYITKNDLFAPDPSCQIVKDYIGKS
>Mature_361_residues
MINRKPFFIELELTYKCSQQCIYCHNPPKDLKFYIADKVPKPRSVIEMNELNLSEWISVINQIKRLDEKYEGIMDVVITG
GEPLLRSDLEEILSYVTRQKLRHMLLSSGEPISDDRITKLLESGLEKIRINLTSHKYVFNIQSPIMHIKNEVAKKINIAK
KFKDFGVKEVGGNIVLTSYYLDFLEEIAELAYKSNLDWIEIHSVIKVGHGYINQKFIVPDPNDERTIQEKLKRLIEIYGE
NFIQNYVDTDILYSRIPIPTNWGEVGLVIAPNGDIYPSSEATSIPLSKLGNIKNDSLVEIWFNNLLLNKIRSLSFLREPC
KSCEVKKLCRGGFRFNAYITKNDLFAPDPSCQIVKDYIGKS

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41615; Mature: 41615

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINRKPFFIELELTYKCSQQCIYCHNPPKDLKFYIADKVPKPRSVIEMNELNLSEWISVI
CCCCCCEEEEEEEEEECCCCEEEECCCCHHCEEEEECCCCCCHHHHHHHHCCHHHHHHHH
NQIKRLDEKYEGIMDVVITGGEPLLRSDLEEILSYVTRQKLRHMLLSSGEPISDDRITKL
HHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LESGLEKIRINLTSHKYVFNIQSPIMHIKNEVAKKINIAKKFKDFGVKEVGGNIVLTSYY
HHHHHHHEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEHHHH
LDFLEEIAELAYKSNLDWIEIHSVIKVGHGYINQKFIVPDPNDERTIQEKLKRLIEIYGE
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
NFIQNYVDTDILYSRIPIPTNWGEVGLVIAPNGDIYPSSEATSIPLSKLGNIKNDSLVEI
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCHHHH
WFNNLLLNKIRSLSFLREPCKSCEVKKLCRGGFRFNAYITKNDLFAPDPSCQIVKDYIGK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHCCC
S
C
>Mature Secondary Structure
MINRKPFFIELELTYKCSQQCIYCHNPPKDLKFYIADKVPKPRSVIEMNELNLSEWISVI
CCCCCCEEEEEEEEEECCCCEEEECCCCHHCEEEEECCCCCCHHHHHHHHCCHHHHHHHH
NQIKRLDEKYEGIMDVVITGGEPLLRSDLEEILSYVTRQKLRHMLLSSGEPISDDRITKL
HHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LESGLEKIRINLTSHKYVFNIQSPIMHIKNEVAKKINIAKKFKDFGVKEVGGNIVLTSYY
HHHHHHHEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEHHHH
LDFLEEIAELAYKSNLDWIEIHSVIKVGHGYINQKFIVPDPNDERTIQEKLKRLIEIYGE
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
NFIQNYVDTDILYSRIPIPTNWGEVGLVIAPNGDIYPSSEATSIPLSKLGNIKNDSLVEI
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCHHHH
WFNNLLLNKIRSLSFLREPCKSCEVKKLCRGGFRFNAYITKNDLFAPDPSCQIVKDYIGK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA