Click here to switch to the map view.

The map label for this gene is acaC [H]

Identifier: 15897457

GI number: 15897457

Start: 462181

End: 462582

Strand: Reverse

Name: acaC [H]

Synonym: SSO0532

Alternate gene names: 15897457

Gene position: 462582-462181 (Counterclockwise)

Preceding gene: 15897458

Following gene: 15897456

Centisome position: 15.46

GC content: 37.81

Gene sequence:

>402_bases
ATGAAAATAGCTCCTCCTCAAGTTTGGAGAAATAAAAGATTCATGTATAAGTTAACAGCGAGTAGGTGTGAACGTTGCGG
ACATATAAGCTTTCCATATTCATCGTATTGCACTAAGTGTGGTAGTAAAAACGTTAAGAAGATTGAGATAAGTGGCAAGG
GAGTATTAGAATCCTACACTGTTTCCTATCAATCTAGAGACGGGCACGAGAAAGGCCTTCCAAGTGTTATTGGTCTGGTT
AGACTAGATGAAGGTGTAGAAATAGTAGCACCTATCGTAGATGCGGATTTAGATAAACTAAAAGAAGGAGTTAAGGTAGA
AGCTACATTAAGGAGAGTTTATACGGACTCATATAATGGTTTAATACAGTATGGGATAAAGTTTAGGGTAGCTGAAGGAT
GA

Upstream 100 bases:

>100_bases
CGTTTAAAGGCAAAAAGGCTAGTGTTGATAATTATATAGTAATTTCCTCAGATGATTTAGGTATGGTGAGTTATGGTATT
AATTTATCGAGGTGATCTAG

Downstream 100 bases:

>100_bases
AAATTGATGAAGTGGTTGAAAAGTTAGTAAAGGGAGAAATTTCTTTTCATGAAGTTGACAATTTATTAGAAGCAAATGCT
GCAATGGTTGCGAGGAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKIAPPQVWRNKRFMYKLTASRCERCGHISFPYSSYCTKCGSKNVKKIEISGKGVLESYTVSYQSRDGHEKGLPSVIGLV
RLDEGVEIVAPIVDADLDKLKEGVKVEATLRRVYTDSYNGLIQYGIKFRVAEG

Sequences:

>Translated_133_residues
MKIAPPQVWRNKRFMYKLTASRCERCGHISFPYSSYCTKCGSKNVKKIEISGKGVLESYTVSYQSRDGHEKGLPSVIGLV
RLDEGVEIVAPIVDADLDKLKEGVKVEATLRRVYTDSYNGLIQYGIKFRVAEG
>Mature_133_residues
MKIAPPQVWRNKRFMYKLTASRCERCGHISFPYSSYCTKCGSKNVKKIEISGKGVLESYTVSYQSRDGHEKGLPSVIGLV
RLDEGVEIVAPIVDADLDKLKEGVKVEATLRRVYTDSYNGLIQYGIKFRVAEG

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 14937; Mature: 14937

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAPPQVWRNKRFMYKLTASRCERCGHISFPYSSYCTKCGSKNVKKIEISGKGVLESYT
CCCCCCHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEE
VSYQSRDGHEKGLPSVIGLVRLDEGVEIVAPIVDADLDKLKEGVKVEATLRRVYTDSYNG
EEECCCCCCCCCCHHHHHHEECCCCCEEEHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCC
LIQYGIKFRVAEG
EEEECEEEEEECC
>Mature Secondary Structure
MKIAPPQVWRNKRFMYKLTASRCERCGHISFPYSSYCTKCGSKNVKKIEISGKGVLESYT
CCCCCCHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEE
VSYQSRDGHEKGLPSVIGLVRLDEGVEIVAPIVDADLDKLKEGVKVEATLRRVYTDSYNG
EEECCCCCCCCCCHHHHHHEECCCCCEEEHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCC
LIQYGIKFRVAEG
EEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550425 [H]