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The map label for this gene is 15897441

Identifier: 15897441

GI number: 15897441

Start: 447338

End: 447715

Strand: Reverse

Name: 15897441

Synonym: SSO0518

Alternate gene names: NA

Gene position: 447715-447338 (Counterclockwise)

Preceding gene: 15897442

Following gene: 15897440

Centisome position: 14.96

GC content: 42.06

Gene sequence:

>378_bases
ATGGTCGATCTCGTAACTGAAGCAAAGTCTTCGGGCGAGGGCGTGACGAGCCCCTACAGTCAGACTGAACATTGTGAAAA
TATTCACGAATATAGGTGTGACACAAGGGTAGGGGTAATTGGAATAGACGTATCAAAAGAACACTTGGTAACAAGTAAGG
GGAGGGTGAGGAAATTCACAAACAACGAGAAGGGCTACGAAGAAATACTAACCATGAAGCCAAACATCATCGTGATAGAA
CCCACAAGAGTATACTCAACAAGACCTTGCCAATACTTCAAAGAAAGAGGAGTGAAAGTCCTACTAGTCAGTACTACCTT
GTTATGGAAAGAAAAGGATGTAAGGGGAAAAAGATTTTTACGACGCAGAAAAACTTGA

Upstream 100 bases:

>100_bases
GGTTTACGAGATTCATTCTAGTACTACCACAAAAAGATTTCGTAACCTATATATAGGTTAATTAGCTGGGGAGAGTAATA
TTCTCCTCAGCTGGGGAAAA

Downstream 100 bases:

>100_bases
AAACATGGTAAATAATGCTAGAGAATACGTTAACAACCCCTTGAAAGAGTTAGTATCACTCTACCTCTTCATGAAGGATG
CCCAAACAAAACAAGAGAAC

Product: transposon ISC1229 Orf1

Products: NA

Alternate protein names: Transposase ISC; Transposon; Partial Transposase In ISC; Second ORF In Transposon ISC

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MVDLVTEAKSSGEGVTSPYSQTEHCENIHEYRCDTRVGVIGIDVSKEHLVTSKGRVRKFTNNEKGYEEILTMKPNIIVIE
PTRVYSTRPCQYFKERGVKVLLVSTTLLWKEKDVRGKRFLRRRKT

Sequences:

>Translated_125_residues
MVDLVTEAKSSGEGVTSPYSQTEHCENIHEYRCDTRVGVIGIDVSKEHLVTSKGRVRKFTNNEKGYEEILTMKPNIIVIE
PTRVYSTRPCQYFKERGVKVLLVSTTLLWKEKDVRGKRFLRRRKT
>Mature_125_residues
MVDLVTEAKSSGEGVTSPYSQTEHCENIHEYRCDTRVGVIGIDVSKEHLVTSKGRVRKFTNNEKGYEEILTMKPNIIVIE
PTRVYSTRPCQYFKERGVKVLLVSTTLLWKEKDVRGKRFLRRRKT

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14491; Mature: 14491

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDLVTEAKSSGEGVTSPYSQTEHCENIHEYRCDTRVGVIGIDVSKEHLVTSKGRVRKFT
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHEECCCCCEEECC
NNEKGYEEILTMKPNIIVIEPTRVYSTRPCQYFKERGVKVLLVSTTLLWKEKDVRGKRFL
CCCCCHHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCEEEEEEEEEEECCCCCHHHHHH
RRRKT
HHCCC
>Mature Secondary Structure
MVDLVTEAKSSGEGVTSPYSQTEHCENIHEYRCDTRVGVIGIDVSKEHLVTSKGRVRKFT
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHEECCCCCEEECC
NNEKGYEEILTMKPNIIVIEPTRVYSTRPCQYFKERGVKVLLVSTTLLWKEKDVRGKRFL
CCCCCHHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCEEEEEEEEEEECCCCCHHHHHH
RRRKT
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA