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The map label for this gene is 15897434

Identifier: 15897434

GI number: 15897434

Start: 443033

End: 443440

Strand: Direct

Name: 15897434

Synonym: SSO0509

Alternate gene names: NA

Gene position: 443033-443440 (Clockwise)

Preceding gene: 15897432

Following gene: 15897437

Centisome position: 14.81

GC content: 48.53

Gene sequence:

>408_bases
ATGAACCTCGTAGCCCTCGCACAACTTATACTATTCGTCCTAAGAAATTTAAACCTTAAGCCCCGAAAGCACAAGCCAGA
GGAAATCGCATTAGCCATTGCAGCTTACGTGATGGGAGTACAGATCACGAAGCTCAATATACCGCCCTCCACGTTGTATT
ACTACACCAAGAAGCTCGGGGTAAAGAGGAGGAAGGACGCGAGACCGAGATGTCCTTCCTGCAACTCGGATAGCACTTTA
CGGTTTTCTCCTCCTCTTGAACAGTTTTTTGATCCCACCCGCCTCACGGTAAATACTTTTTATCAATCTGGCCAACCTTT
TGGCCCCGAGTACCAGACCCGTGGAGTACTTGAAGTATTGGACAACGAGGAGAGAGAGCCTTCAAGGCCACGAAGCCTGA
GTTCCTAA

Upstream 100 bases:

>100_bases
ATTTTTGTAGTCGTTACAACGAGTGGACCTGAAGACTTGAGGACGTGTGGGATTGAAAAGACTTATGTGCGAGGACCTCG
AGGTTCTTTAGGTAGGCATC

Downstream 100 bases:

>100_bases
CCCAAGTCAAGAAGGACCCACCCTCGAGTCCCAAGGCCTTGAGCTCCCTGATCAAGACCTCGATGTCCCAACGGTTCTCC
CAGGTCGTTATGATATCTTC

Product: transposon ISC1173 Orf1

Products: NA

Alternate protein names: Transposase ISC; IS1 Transposase

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNLVALAQLILFVLRNLNLKPRKHKPEEIALAIAAYVMGVQITKLNIPPSTLYYYTKKLGVKRRKDARPRCPSCNSDSTL
RFSPPLEQFFDPTRLTVNTFYQSGQPFGPEYQTRGVLEVLDNEEREPSRPRSLSS

Sequences:

>Translated_135_residues
MNLVALAQLILFVLRNLNLKPRKHKPEEIALAIAAYVMGVQITKLNIPPSTLYYYTKKLGVKRRKDARPRCPSCNSDSTL
RFSPPLEQFFDPTRLTVNTFYQSGQPFGPEYQTRGVLEVLDNEEREPSRPRSLSS
>Mature_135_residues
MNLVALAQLILFVLRNLNLKPRKHKPEEIALAIAAYVMGVQITKLNIPPSTLYYYTKKLGVKRRKDARPRCPSCNSDSTL
RFSPPLEQFFDPTRLTVNTFYQSGQPFGPEYQTRGVLEVLDNEEREPSRPRSLSS

Specific function: Unknown

COG id: COG3677

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15454; Mature: 15454

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVALAQLILFVLRNLNLKPRKHKPEEIALAIAAYVMGVQITKLNIPPSTLYYYTKKLG
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHC
VKRRKDARPRCPSCNSDSTLRFSPPLEQFFDPTRLTVNTFYQSGQPFGPEYQTRGVLEVL
CCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCHHHHHHHHHCCCCCCCCCHHCHHHHHH
DNEEREPSRPRSLSS
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLVALAQLILFVLRNLNLKPRKHKPEEIALAIAAYVMGVQITKLNIPPSTLYYYTKKLG
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHC
VKRRKDARPRCPSCNSDSTLRFSPPLEQFFDPTRLTVNTFYQSGQPFGPEYQTRGVLEVL
CCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCHHHHHHHHHCCCCCCCCCHHCHHHHHH
DNEEREPSRPRSLSS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA