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The map label for this gene is yejH [C]

Identifier: 15897401

GI number: 15897401

Start: 407678

End: 409012

Strand: Direct

Name: yejH [C]

Synonym: SSO0473

Alternate gene names: 15897401

Gene position: 407678-409012 (Clockwise)

Preceding gene: 15897399

Following gene: 15897402

Centisome position: 13.62

GC content: 36.03

Gene sequence:

>1335_bases
GTGGTACGATTACGATACTTTAAATGTTTATTACTATCCGATTTTTCAGCTCCCGGTTTAAGCTGGAATGATGAGTTTAA
GTGCTATATAGGCCAAGCAAACAAGTATCGAGAAGTCCTTTATTACTATAAGAGGTCTCACGTTGAAGTTGAGGATAGCG
TCCTAGAGTTATTACCTTTTCCTTTGATTGTAGATCGAATAAAATTAAGGGAATATCAGCAAGAGGCTTTGAATGCATGG
TTAAAGAGTAAGCTAGGGATAATAGTGATTCCCACTGGAGGTGGAAAAACTGTAATAGGATTGAAGGCCATAGCTCTGAT
TAGGCTTGCTACACTAATAATAGTGCCTACAATCGATTTATTACAGCAATGGTATGAAAATATAAGAGAGTTACTTGGAG
TTGAGGCGGGGAGGGTAGGGGGAGGATATGATGAACTTAAGGGAATAACCGTAATTACGTATGATTCAGCGTACACTCAG
CTAGAGAAAATAGGAAATAAATTTGGATTAGTAATTTTTGATGAAGTTCATCATCTACCTTCAGAAGGATATTCCATAAT
AGCTCAAGGTTTAGCTGCCCCATATAGATTAGGCTTGACTGCTACGCCAGAAAGAAGTGACGGAAGACACAAACTGTATC
CATCACTCGTTGGGCCCTTAGTATATAGGATTACAGTTTCTAACCTAGTCGGAAAATATCTTTCAAGTTTTGAAATTCAA
CGTATATACGTAAATCTCACTGAAGACGAAGAGAAATTATATAGGCACTATAGAGGAATCCTAAAGAAATTTTTATCTCA
ACGTAATCTTAAGTTAAAGTCATTGAATGATTTCAATAGGCTACTTAGGCTAGCAGTTAAGGATAAGGAAGCTAGAGAGG
CATTATTAGCATGGCATGAAGCTCTCAAGATAGCTGTAAATTCCAAGGCAAAGTTAGAGAAGCTTAAAGACTTGCTCAAG
GAGCTAAATGGTGAGAAAATTATAATATTTACTAGAAATACGTCAATGGTATACGAGATATCAAGACTATTCTTAATTCC
TGCAGTTACATACAAGACGAATAAGCAAGAAAGGATAGAGATTCTGGAGAAATTTAGATCTGGAAAATACAATGTAATAG
TAACTTCTAGTGTCCTCGATGAAGGTATTGACGTTCCAGATGCTTCTATTGGTATAGTTCTAGGAGGTTATGGAACCTCT
AGGCAATTCATACAGAGGTTAGGTAGAATCTTAAGGAAGAAAGAGAATAAAAAAGCTAGATTGATAGAAATAATAACTAA
AGGTACTAGTGATTATAATTTAAGTAAAAGGCGAAGACAAAATGCTAACCTCTGA

Upstream 100 bases:

>100_bases
ATACAATATTGCTCCTTTCATTAGTATAAGGTACAGTATAATCATATTTAAACATTTCTAAACATCTCCCTTTATAACTG
CGAAAACTATTCATTATATC

Downstream 100 bases:

>100_bases
TCTAGCTAGGTTTAAGATAGAAAATCAGAGGATAATTCCACTATTTGCTACAGATTCTGACATAGATGTAGCAAAGGAAG
TCATTGACATGTTTAAAATA

Product: DNA repair protein rad25

Products: NA

Alternate protein names: Type III Restriction Res Subunit; DNA Repair Helicase; Helicase Domain-Containing Protein; Helicase Domain Protein; ATP-Dependent DNA Helicase; DNA Repair Helicase RAD; Helicase; DNA Repair Protein Rad; DNA Repair Helicase Rad; Superfamily II DNA/RNA Helicase; Type III Restriction Res Subunit Family; DNA Helicase; DNA Repair Protein RAD; DNA/RNA Helicase; DNA Repair Protein; DNA/RNA Helicase Superfamily II; Helicase-Like Protein; Helicase Protein; ATP-Dependent Helicase; DNA Or RNA Helicase Of Superfamily II; DNA/RNA Repair Helicase; Helicase ATP-Dependent; Type III Restriction- System Subunit Res; Helicase DNA Repair; DEAD/DEAH Box Helicase Domain-Containing Protein; ATP-Dependet DEAD/DEAH Box Helicase; DNA Or RNA Helicase; Helicase DNA Repair Rad; RAD25-Type DNA Repair Helicase; DNA Repair Related Protein; DEAD/DEAH Box Helicase-Like; Restriction Endonuclease Family Protein; DNA-Helicase; Nucleic Acid ATP-Dependent Helicase; XPB/RAD25-Related Helicase; Helicase ATP-Dependent Intein-Containing; DNA Or RNA Helicase Of Superfamily Protein II; DEAD/DEAH Box Helicase

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MVRLRYFKCLLLSDFSAPGLSWNDEFKCYIGQANKYREVLYYYKRSHVEVEDSVLELLPFPLIVDRIKLREYQQEALNAW
LKSKLGIIVIPTGGGKTVIGLKAIALIRLATLIIVPTIDLLQQWYENIRELLGVEAGRVGGGYDELKGITVITYDSAYTQ
LEKIGNKFGLVIFDEVHHLPSEGYSIIAQGLAAPYRLGLTATPERSDGRHKLYPSLVGPLVYRITVSNLVGKYLSSFEIQ
RIYVNLTEDEEKLYRHYRGILKKFLSQRNLKLKSLNDFNRLLRLAVKDKEAREALLAWHEALKIAVNSKAKLEKLKDLLK
ELNGEKIIIFTRNTSMVYEISRLFLIPAVTYKTNKQERIEILEKFRSGKYNVIVTSSVLDEGIDVPDASIGIVLGGYGTS
RQFIQRLGRILRKKENKKARLIEIITKGTSDYNLSKRRRQNANL

Sequences:

>Translated_444_residues
MVRLRYFKCLLLSDFSAPGLSWNDEFKCYIGQANKYREVLYYYKRSHVEVEDSVLELLPFPLIVDRIKLREYQQEALNAW
LKSKLGIIVIPTGGGKTVIGLKAIALIRLATLIIVPTIDLLQQWYENIRELLGVEAGRVGGGYDELKGITVITYDSAYTQ
LEKIGNKFGLVIFDEVHHLPSEGYSIIAQGLAAPYRLGLTATPERSDGRHKLYPSLVGPLVYRITVSNLVGKYLSSFEIQ
RIYVNLTEDEEKLYRHYRGILKKFLSQRNLKLKSLNDFNRLLRLAVKDKEAREALLAWHEALKIAVNSKAKLEKLKDLLK
ELNGEKIIIFTRNTSMVYEISRLFLIPAVTYKTNKQERIEILEKFRSGKYNVIVTSSVLDEGIDVPDASIGIVLGGYGTS
RQFIQRLGRILRKKENKKARLIEIITKGTSDYNLSKRRRQNANL
>Mature_444_residues
MVRLRYFKCLLLSDFSAPGLSWNDEFKCYIGQANKYREVLYYYKRSHVEVEDSVLELLPFPLIVDRIKLREYQQEALNAW
LKSKLGIIVIPTGGGKTVIGLKAIALIRLATLIIVPTIDLLQQWYENIRELLGVEAGRVGGGYDELKGITVITYDSAYTQ
LEKIGNKFGLVIFDEVHHLPSEGYSIIAQGLAAPYRLGLTATPERSDGRHKLYPSLVGPLVYRITVSNLVGKYLSSFEIQ
RIYVNLTEDEEKLYRHYRGILKKFLSQRNLKLKSLNDFNRLLRLAVKDKEAREALLAWHEALKIAVNSKAKLEKLKDLLK
ELNGEKIIIFTRNTSMVYEISRLFLIPAVTYKTNKQERIEILEKFRSGKYNVIVTSSVLDEGIDVPDASIGIVLGGYGTS
RQFIQRLGRILRKKENKKARLIEIITKGTSDYNLSKRRRQNANL

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322048, Length=400, Percent_Identity=26, Blast_Score=122, Evalue=8e-29,
Organism=Drosophila melanogaster, GI221331068, Length=403, Percent_Identity=25.0620347394541, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI24662247, Length=403, Percent_Identity=25.0620347394541, Blast_Score=111, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50818; Mature: 50818

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLRYFKCLLLSDFSAPGLSWNDEFKCYIGQANKYREVLYYYKRSHVEVEDSVLELLPF
CCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCH
PLIVDRIKLREYQQEALNAWLKSKLGIIVIPTGGGKTVIGLKAIALIRLATLIIVPTIDL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCHHH
LQQWYENIRELLGVEAGRVGGGYDELKGITVITYDSAYTQLEKIGNKFGLVIFDEVHHLP
HHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEECHHHHHHHHHCCCCCEEEEHHHHCCC
SEGYSIIAQGLAAPYRLGLTATPERSDGRHKLYPSLVGPLVYRITVSNLVGKYLSSFEIQ
CCCHHHHHHHHCCCEEECCEECCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCEEE
RIYVNLTEDEEKLYRHYRGILKKFLSQRNLKLKSLNDFNRLLRLAVKDKEAREALLAWHE
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCCHHHHHHHHHHHH
ALKIAVNSKAKLEKLKDLLKELNGEKIIIFTRNTSMVYEISRLFLIPAVTYKTNKQERIE
HHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEEEEECCCHHHHHH
ILEKFRSGKYNVIVTSSVLDEGIDVPDASIGIVLGGYGTSRQFIQRLGRILRKKENKKAR
HHHHHHCCCEEEEEEHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHH
LIEIITKGTSDYNLSKRRRQNANL
HHHHHHCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MVRLRYFKCLLLSDFSAPGLSWNDEFKCYIGQANKYREVLYYYKRSHVEVEDSVLELLPF
CCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCCH
PLIVDRIKLREYQQEALNAWLKSKLGIIVIPTGGGKTVIGLKAIALIRLATLIIVPTIDL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCHHH
LQQWYENIRELLGVEAGRVGGGYDELKGITVITYDSAYTQLEKIGNKFGLVIFDEVHHLP
HHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEECHHHHHHHHHCCCCCEEEEHHHHCCC
SEGYSIIAQGLAAPYRLGLTATPERSDGRHKLYPSLVGPLVYRITVSNLVGKYLSSFEIQ
CCCHHHHHHHHCCCEEECCEECCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCEEE
RIYVNLTEDEEKLYRHYRGILKKFLSQRNLKLKSLNDFNRLLRLAVKDKEAREALLAWHE
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCCHHHHHHHHHHHH
ALKIAVNSKAKLEKLKDLLKELNGEKIIIFTRNTSMVYEISRLFLIPAVTYKTNKQERIE
HHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHEEEEEECCCHHHHHH
ILEKFRSGKYNVIVTSSVLDEGIDVPDASIGIVLGGYGTSRQFIQRLGRILRKKENKKAR
HHHHHHCCCEEEEEEHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHH
LIEIITKGTSDYNLSKRRRQNANL
HHHHHHCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA