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The map label for this gene is ycgF [H]

Identifier: 15897386

GI number: 15897386

Start: 393598

End: 394158

Strand: Direct

Name: ycgF [H]

Synonym: SSO0455

Alternate gene names: 15897386

Gene position: 393598-394158 (Clockwise)

Preceding gene: 15897385

Following gene: 15897387

Centisome position: 13.15

GC content: 33.87

Gene sequence:

>561_bases
ATGTTACTCACTTACTTGGGCTTAGGAATTATTCTTGGTTTATCCATGGCTGCACCTCCCGGACCGGTTAATGCAATGAT
CGCAAATGAGTCTATGAAATCGTGGCTTCATGGAAGTAGTATTGGGGCGGGAGCAATGACAGCTGATTTAATTTTCTTTA
TAATAGTTTACTTCATTCAAGGATACATCCCTACACCAATTAGAAATGCCCTATATATAATAGGTGGTATTTTCATGTTA
TATTTATCGTACTTAACAATTAGAGCTAAAATGCCTTCTAAGTCCATAAAAGGAAATTATTTCATAGGACTTTCCATGGG
TTTAACTAATCCATACCAAATAAGTTGGTGGATTACTGTTGGAATTTCCATTATCAGGTCCCTTTCAATTTTAATAATAC
CGGGATTTTTTGTTGGTATACTAATATGGATAATAGCTTTTCCGAAGGCAGTAAATATGTTAGGATCAAAATACGTCAAG
TATGTAAAGGTAATTTCATCTGTAATATTAGTCATATTCGGTGTCTACTTATTATACGAGGGTATTCTAAATGTTATCTA
A

Upstream 100 bases:

>100_bases
TATCTGAAAGGAAAGAGCTAATTTACGTCCTTTTCAATAACGTTTACTCGTTTGATGACGCTTTAAGTTTTAAAAGGATG
ATTGAAGGATAGTCTAATAA

Downstream 100 bases:

>100_bases
GCAGGAAATAAGAGAATTAATATGGAGAAAATTAGAGGAGGGAAATATAGCACTGTTTCCGAGGCCAGTTTACGGTAGGA
TTCCTAATTTTAAAGGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MLLTYLGLGIILGLSMAAPPGPVNAMIANESMKSWLHGSSIGAGAMTADLIFFIIVYFIQGYIPTPIRNALYIIGGIFML
YLSYLTIRAKMPSKSIKGNYFIGLSMGLTNPYQISWWITVGISIIRSLSILIIPGFFVGILIWIIAFPKAVNMLGSKYVK
YVKVISSVILVIFGVYLLYEGILNVI

Sequences:

>Translated_186_residues
MLLTYLGLGIILGLSMAAPPGPVNAMIANESMKSWLHGSSIGAGAMTADLIFFIIVYFIQGYIPTPIRNALYIIGGIFML
YLSYLTIRAKMPSKSIKGNYFIGLSMGLTNPYQISWWITVGISIIRSLSILIIPGFFVGILIWIIAFPKAVNMLGSKYVK
YVKVISSVILVIFGVYLLYEGILNVI
>Mature_186_residues
MLLTYLGLGIILGLSMAAPPGPVNAMIANESMKSWLHGSSIGAGAMTADLIFFIIVYFIQGYIPTPIRNALYIIGGIFML
YLSYLTIRAKMPSKSIKGNYFIGLSMGLTNPYQISWWITVGISIIRSLSILIIPGFFVGILIWIIAFPKAVNMLGSKYVK
YVKVISSVILVIFGVYLLYEGILNVI

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 20439; Mature: 20439

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTYLGLGIILGLSMAAPPGPVNAMIANESMKSWLHGSSIGAGAMTADLIFFIIVYFIQ
CHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
GYIPTPIRNALYIIGGIFMLYLSYLTIRAKMPSKSIKGNYFIGLSMGLTNPYQISWWITV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEHHHHH
GISIIRSLSILIIPGFFVGILIWIIAFPKAVNMLGSKYVKYVKVISSVILVIFGVYLLYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILNVI
HHHHCC
>Mature Secondary Structure
MLLTYLGLGIILGLSMAAPPGPVNAMIANESMKSWLHGSSIGAGAMTADLIFFIIVYFIQ
CHHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
GYIPTPIRNALYIIGGIFMLYLSYLTIRAKMPSKSIKGNYFIGLSMGLTNPYQISWWITV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEHHHHH
GISIIRSLSILIIPGFFVGILIWIIAFPKAVNMLGSKYVKYVKVISSVILVIFGVYLLYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILNVI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]