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The map label for this gene is rps27AE

Identifier: 15897364

GI number: 15897364

Start: 377589

End: 377816

Strand: Reverse

Name: rps27AE

Synonym: SSO5844

Alternate gene names: 15897364

Gene position: 377816-377589 (Counterclockwise)

Preceding gene: 15897365

Following gene: 15897363

Centisome position: 12.63

GC content: 38.16

Gene sequence:

>228_bases
ATGCTGGAACTAAACAAAAGAAAGGAGGAAGCAAAGGTGGCCAAGGAGCAAAAGGTTAAAGCAATAGTAAGGACTTATTA
CGTGATCGAAGGGAATAAGGTAAAGCTGAAAAATAAGAAATGCCCTAGATGTGGAAGTATAATGGCTCATCACCTAAAAC
CAAATGAAAGATGGTCTTGTGGAAAGTGTGGTTACACTGAGTTTATAGGCGCTTCTAAGAAAAGATAA

Upstream 100 bases:

>100_bases
TCTACAAGCTATGGAGCTGGCATAAGTAACGTGAAATTACATATTTATAAATCCCGTGAAATATTAGAGAAAGTTGAGCC
AAAATATTTATTAGATAGAG

Downstream 100 bases:

>100_bases
ATATGTTGTATTAGGTATGAGTCACTGCTCACACCTTCGGCGTAGATAGTAGAGATCGCCACCTTATATATTGGCGATGA
AGGATACTTATCCTAAGAAG

Product: 30S ribosomal protein S27ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MLELNKRKEEAKVAKEQKVKAIVRTYYVIEGNKVKLKNKKCPRCGSIMAHHLKPNERWSCGKCGYTEFIGASKKR

Sequences:

>Translated_75_residues
MLELNKRKEEAKVAKEQKVKAIVRTYYVIEGNKVKLKNKKCPRCGSIMAHHLKPNERWSCGKCGYTEFIGASKKR
>Mature_75_residues
MLELNKRKEEAKVAKEQKVKAIVRTYYVIEGNKVKLKNKKCPRCGSIMAHHLKPNERWSCGKCGYTEFIGASKKR

Specific function: Unknown

COG id: COG1998

COG function: function code J; Ribosomal protein S27AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27Ae family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27A_SULSO (Q97ZY7)

Other databases:

- EMBL:   AE006641
- PIR:   H90187
- RefSeq:   NP_341969.1
- ProteinModelPortal:   Q97ZY7
- SMR:   Q97ZY7
- GeneID:   1455569
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO5844
- NMPDR:   fig|273057.1.peg.392
- HOGENOM:   HBG512791
- OMA:   ERWACGK
- ProtClustDB:   PRK00432
- BioCyc:   SSOL273057:SSO5844-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00777
- InterPro:   IPR002906
- InterPro:   IPR022845

Pfam domain/function: PF01599 Ribosomal_S27

EC number: NA

Molecular weight: Translated: 8681; Mature: 8681

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELNKRKEEAKVAKEQKVKAIVRTYYVIEGNKVKLKNKKCPRCGSIMAHHLKPNERWSC
CCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCHHHHHHHCCCCCCCCCC
GKCGYTEFIGASKKR
CCCCCHHHCCCCCCC
>Mature Secondary Structure
MLELNKRKEEAKVAKEQKVKAIVRTYYVIEGNKVKLKNKKCPRCGSIMAHHLKPNERWSC
CCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCCCCCHHHHHHHCCCCCCCCCC
GKCGYTEFIGASKKR
CCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726