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The map label for this gene is rps25E

Identifier: 15897354

GI number: 15897354

Start: 370522

End: 370854

Strand: Reverse

Name: rps25E

Synonym: SSO0425

Alternate gene names: 15897354

Gene position: 370854-370522 (Counterclockwise)

Preceding gene: 15897361

Following gene: 15897351

Centisome position: 12.39

GC content: 34.23

Gene sequence:

>333_bases
ATGGGTGGAGCTTCGAAGAAACCTATTTCAACAATGGAAAAGAGATTAAAGAAGGAAGCTGAAAAACAACAGAAGGCAGA
GGAGAAAAAGAAGGGTCCGTCTAAAACTGGGAAAGAGATAATTAGTAGAGCTGTAACTATAGATGAAGAAACTAAAAAGA
AAGTTCTAGATGAAATAAAGAAGGAGAGTATCATAACCCCGTACGCCTTAGCTACCAAATCGGGAATAAGCATTAGTGTA
GCTAGAAAAATACTAAAGGAGTTAGAAAACCAAAACGTAGTAAAGTTATATTCTAAGAATAGAAGATTAGAAATATATAT
AGCAGCATCTTAA

Upstream 100 bases:

>100_bases
AAGCAAACTTTGATACTCTGCTTATGGTCTCTTCTAATAATTCAGATGACATCTATAATTTATTAGGCAGAATTGGAATT
TAAAGCATAGTGAGTAAGAG

Downstream 100 bases:

>100_bases
AAATTACTCCTCTTCCATTGTAGAAGCAGATCTCTTCTTTGCCTCCCCTTTAATCTTTTTTACACCTTTACAAAGACCGT
TTATTATCGGTTCTAGATAA

Product: 30S ribosomal protein S25e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MGGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKKVLDEIKKESIITPYALATKSGISISV
ARKILKELENQNVVKLYSKNRRLEIYIAAS

Sequences:

>Translated_110_residues
MGGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKKVLDEIKKESIITPYALATKSGISISV
ARKILKELENQNVVKLYSKNRRLEIYIAAS
>Mature_109_residues
GGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKKVLDEIKKESIITPYALATKSGISISVA
RKILKELENQNVVKLYSKNRRLEIYIAAS

Specific function: Unknown

COG id: COG4901

COG function: function code J; Ribosomal protein S25

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S25e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS25_SULSO (Q97ZZ6)

Other databases:

- EMBL:   AE006641
- PIR:   F90186
- RefSeq:   NP_341959.1
- ProteinModelPortal:   Q97ZZ6
- GeneID:   1455559
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0425
- NMPDR:   fig|273057.1.peg.382
- HOGENOM:   HBG553558
- OMA:   KYGIKMS
- ProtClustDB:   PRK09334
- BioCyc:   SSOL273057:SSO0425-MONOMER
- GO:   GO:0005840
- InterPro:   IPR004977
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- ProDom:   PD012268

Pfam domain/function: PF03297 Ribosomal_S25

EC number: NA

Molecular weight: Translated: 12346; Mature: 12214

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKKVLDEIK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KESIITPYALATKSGISISVARKILKELENQNVVKLYSKNRRLEIYIAAS
HHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEHCCCCCEEEEEEECC
>Mature Secondary Structure 
GGASKKPISTMEKRLKKEAEKQQKAEEKKKGPSKTGKEIISRAVTIDEETKKKVLDEIK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KESIITPYALATKSGISISVARKILKELENQNVVKLYSKNRRLEIYIAAS
HHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726