Click here to switch to the map view.

The map label for this gene is 15897240

Identifier: 15897240

GI number: 15897240

Start: 252385

End: 253464

Strand: Reverse

Name: 15897240

Synonym: SSO0295

Alternate gene names: NA

Gene position: 253464-252385 (Counterclockwise)

Preceding gene: 15897241

Following gene: 15897239

Centisome position: 8.47

GC content: 30.56

Gene sequence:

>1080_bases
ATGGTCAAAAGAAATTCTAAAGAGATAGTAATGGAAGTATTCTTAGGAGAGCCGAATAATCAAGAAATAAGGGAAGTAGT
TAGGAATGTGTATTCTAAGGATAATTTGTGTTTATCTGCGTACTATTCTATAGAGCCTATCCTATTTTCATTTATTATTT
CCAAAAATACTAAGAATTCTTTCACTCTTTCGTTCATTCCAGAAGAATGTGAAACACAAATTAGACTTGACGCTAACGGG
AAATGGATAATAGATAATAAGAAAAAATATTTCTTGGGTCAGAATTCCTTTTGTTCATATTTACCTATAACTGCTGAAGA
TGTCTTGCCAATTGTTAGTTGTATTATAACGTCTACAATATTAGACAGAAGATCACTTTCCGAATGGGAATTAGAGACAA
TAAGGGAAATGGAGAAATTTGATATGACTATCGAAAAAAATCTGAAAATTCCTGCATATAAAACTTTACCAGCCTTTTTA
TCGTTAATGTTTTCTCTAGATCCTTATATACCTGGCATATCTGGCAATAGAGAAAATGCCATAAGTCTCATAAGAGAGGT
AAACGCTAGTGAGATATCGAAATTAGAAGATTTGAATGAGAGTCAGCTAAATACATTACTTTTCAGAATAATTTCTACTA
TTGTGAAAGAAAATCCAAAATTCACTAGGGATGATATAATTACGGATAGATTTTTTTATCTTGATTATGATATATTAGAG
TTGGCATTCTCTTTAATTTATTCGTTTGATACTATTGGCAGTAATGAGATCTTACAGTTTGTCCTGTCATCCTCTTATGC
AGAGGCATTAATTAGTAGATTTAGGCAAACTCTCTCCAAGGGATTCTCAATCAATTCTATTGAAAATAAACAGTCATATT
ATATTGTTGAGACATCTAATCTCACTTCTCCTCTCTTAGCACAAATAATATTGTTACAGTTACAAAAAATAAGGAGAGAT
AAAATGATAGTAATCAGAGACAATGATAGACTTTTCACTAGTAGATTTTTTATTCCGTCAGTAAAGAAAGAAGGATTGAT
TAAAATTGATGATAGAGTTAAGAATCTCATCGGAATATAA

Upstream 100 bases:

>100_bases
TAAATCCCTCTTACGTCTTTGCTACAAGATTGAACTATATTATATCAAACTTGCTTGGATCTATTTTCTTTAAGGATATG
AGCTTTGAAGAGCTTAAAAA

Downstream 100 bases:

>100_bases
GGATGCAGAACTATTTATAAGAAGTTTAAAAGTTGATGATGTAAATTTGCCAGAAGGAATGTCAATTGAAAGCAAAGTAG
AAGGCAAAGAGTTTGAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MVKRNSKEIVMEVFLGEPNNQEIREVVRNVYSKDNLCLSAYYSIEPILFSFIISKNTKNSFTLSFIPEECETQIRLDANG
KWIIDNKKKYFLGQNSFCSYLPITAEDVLPIVSCIITSTILDRRSLSEWELETIREMEKFDMTIEKNLKIPAYKTLPAFL
SLMFSLDPYIPGISGNRENAISLIREVNASEISKLEDLNESQLNTLLFRIISTIVKENPKFTRDDIITDRFFYLDYDILE
LAFSLIYSFDTIGSNEILQFVLSSSYAEALISRFRQTLSKGFSINSIENKQSYYIVETSNLTSPLLAQIILLQLQKIRRD
KMIVIRDNDRLFTSRFFIPSVKKEGLIKIDDRVKNLIGI

Sequences:

>Translated_359_residues
MVKRNSKEIVMEVFLGEPNNQEIREVVRNVYSKDNLCLSAYYSIEPILFSFIISKNTKNSFTLSFIPEECETQIRLDANG
KWIIDNKKKYFLGQNSFCSYLPITAEDVLPIVSCIITSTILDRRSLSEWELETIREMEKFDMTIEKNLKIPAYKTLPAFL
SLMFSLDPYIPGISGNRENAISLIREVNASEISKLEDLNESQLNTLLFRIISTIVKENPKFTRDDIITDRFFYLDYDILE
LAFSLIYSFDTIGSNEILQFVLSSSYAEALISRFRQTLSKGFSINSIENKQSYYIVETSNLTSPLLAQIILLQLQKIRRD
KMIVIRDNDRLFTSRFFIPSVKKEGLIKIDDRVKNLIGI
>Mature_359_residues
MVKRNSKEIVMEVFLGEPNNQEIREVVRNVYSKDNLCLSAYYSIEPILFSFIISKNTKNSFTLSFIPEECETQIRLDANG
KWIIDNKKKYFLGQNSFCSYLPITAEDVLPIVSCIITSTILDRRSLSEWELETIREMEKFDMTIEKNLKIPAYKTLPAFL
SLMFSLDPYIPGISGNRENAISLIREVNASEISKLEDLNESQLNTLLFRIISTIVKENPKFTRDDIITDRFFYLDYDILE
LAFSLIYSFDTIGSNEILQFVLSSSYAEALISRFRQTLSKGFSINSIENKQSYYIVETSNLTSPLLAQIILLQLQKIRRD
KMIVIRDNDRLFTSRFFIPSVKKEGLIKIDDRVKNLIGI

Specific function: Unknown

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41579; Mature: 41579

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRNSKEIVMEVFLGEPNNQEIREVVRNVYSKDNLCLSAYYSIEPILFSFIISKNTKNS
CCCCCCHHHEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCC
FTLSFIPEECETQIRLDANGKWIIDNKKKYFLGQNSFCSYLPITAEDVLPIVSCIITSTI
EEEEECCCCCCCEEEECCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
LDRRSLSEWELETIREMEKFDMTIEKNLKIPAYKTLPAFLSLMFSLDPYIPGISGNRENA
HHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
ISLIREVNASEISKLEDLNESQLNTLLFRIISTIVKENPKFTRDDIITDRFFYLDYDILE
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECHHHHH
LAFSLIYSFDTIGSNEILQFVLSSSYAEALISRFRQTLSKGFSINSIENKQSYYIVETSN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
LTSPLLAQIILLQLQKIRRDKMIVIRDNDRLFTSRFFIPSVKKEGLIKIDDRVKNLIGI
CCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCEEEHHHHHHHHCC
>Mature Secondary Structure
MVKRNSKEIVMEVFLGEPNNQEIREVVRNVYSKDNLCLSAYYSIEPILFSFIISKNTKNS
CCCCCCHHHEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCC
FTLSFIPEECETQIRLDANGKWIIDNKKKYFLGQNSFCSYLPITAEDVLPIVSCIITSTI
EEEEECCCCCCCEEEECCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
LDRRSLSEWELETIREMEKFDMTIEKNLKIPAYKTLPAFLSLMFSLDPYIPGISGNRENA
HHHCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
ISLIREVNASEISKLEDLNESQLNTLLFRIISTIVKENPKFTRDDIITDRFFYLDYDILE
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECHHHHH
LAFSLIYSFDTIGSNEILQFVLSSSYAEALISRFRQTLSKGFSINSIENKQSYYIVETSN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
LTSPLLAQIILLQLQKIRRDKMIVIRDNDRLFTSRFFIPSVKKEGLIKIDDRVKNLIGI
CCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA