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The map label for this gene is 15897238

Identifier: 15897238

GI number: 15897238

Start: 250595

End: 251596

Strand: Reverse

Name: 15897238

Synonym: SSO0293

Alternate gene names: NA

Gene position: 251596-250595 (Counterclockwise)

Preceding gene: 15897239

Following gene: 15897237

Centisome position: 8.41

GC content: 31.74

Gene sequence:

>1002_bases
TTGAGCTATAATTTCGAAGAGGAACGTGTAATCAAGGAGATACGTGAAAAGAACGCGAAACGTGTTCTTTTACAATTTCC
TGAAGGATTAAAGTATTTTTCTATAGATATAGTAAAGAAGTTAAGGGAAAAACTACCTAACGTTAATTTTATAATATCAG
GTGAGCCTAGTTGGGGTGCTTGCGACATAGCAGAGGATGAGGCACAACAAGTAAATGCTGACCTTATAATTCACTTCGGT
CATACCCCTTATACGTGGTACTATCCCAAGTTTCCTACCATATTTATTAACGCTGAAAGTAATTTAGATATTTCTGAAAA
TGCTCTTCATTCTTTAGAAAATGATATCAGTAAATATAATGGAAGAAAAATCTCATTAACGGCAACTTTACAACATGTAA
GATTATTATCTAAAATTAAGTCTTTCTTAGAAGATAAGGGATACGATATAGTTATAGGTAAACCATCTAATAGATTTATG
TTTGATGGACAAGTTTTAGGATGTGATTATAAAGCTGCTGAAGTAGAAGCAGATATTTATGTGATTGTATCAGGAGGATT
ATTTCACGCTTTAGGTTTAGGATTAGCTACAAACAAACCAACTATAAAACTTGATCCGTATTTACAGAAAAGTGAGGATA
TAACAAATGATGTTAGGAAGATACTGAAAGTTAGATATGGTAAAATATTACAAGCATTAGATAAACGTAGTTGGGTAATT
ATACAAGGGGTTAAGGTTGGACAAAATAGACCAAACATGATAAAATATTTCTATGATAAGTTAACCGAAAAAGGCTATGA
TGTATTTACAGTAACAAATAAGGTATTAACACTAGACATACTTAGAAATTTAGATAGAAATTATATAGACGTATTTTTAG
TCACATCTTGTCCTAGACTGCCAATAGATGACCTATACAACTATGAAAAACCAGTATTAACGCCTGGAGAGGCAAAAATG
ATCATAAATAATAGTCTGGAACCCTATATTTTTCCATGGTGA

Upstream 100 bases:

>100_bases
AATTTGCAAAGGAGGCGTTAAAGATAGCATCAAAGAAACTACCTTTGCGTACTAGAATTGAGATCATTCCATTAAGGCTC
GTAAGACAGGAGGTTCAAAG

Downstream 100 bases:

>100_bases
ACTAAGTGAGAACTCAAGGCGAATTAACTTTACCAGGAGAGGAGTTAGCAGTAATTGAAGAATTTATGACTGGCGATGGT
ACGTATGAACAAAATGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSYNFEEERVIKEIREKNAKRVLLQFPEGLKYFSIDIVKKLREKLPNVNFIISGEPSWGACDIAEDEAQQVNADLIIHFG
HTPYTWYYPKFPTIFINAESNLDISENALHSLENDISKYNGRKISLTATLQHVRLLSKIKSFLEDKGYDIVIGKPSNRFM
FDGQVLGCDYKAAEVEADIYVIVSGGLFHALGLGLATNKPTIKLDPYLQKSEDITNDVRKILKVRYGKILQALDKRSWVI
IQGVKVGQNRPNMIKYFYDKLTEKGYDVFTVTNKVLTLDILRNLDRNYIDVFLVTSCPRLPIDDLYNYEKPVLTPGEAKM
IINNSLEPYIFPW

Sequences:

>Translated_333_residues
MSYNFEEERVIKEIREKNAKRVLLQFPEGLKYFSIDIVKKLREKLPNVNFIISGEPSWGACDIAEDEAQQVNADLIIHFG
HTPYTWYYPKFPTIFINAESNLDISENALHSLENDISKYNGRKISLTATLQHVRLLSKIKSFLEDKGYDIVIGKPSNRFM
FDGQVLGCDYKAAEVEADIYVIVSGGLFHALGLGLATNKPTIKLDPYLQKSEDITNDVRKILKVRYGKILQALDKRSWVI
IQGVKVGQNRPNMIKYFYDKLTEKGYDVFTVTNKVLTLDILRNLDRNYIDVFLVTSCPRLPIDDLYNYEKPVLTPGEAKM
IINNSLEPYIFPW
>Mature_332_residues
SYNFEEERVIKEIREKNAKRVLLQFPEGLKYFSIDIVKKLREKLPNVNFIISGEPSWGACDIAEDEAQQVNADLIIHFGH
TPYTWYYPKFPTIFINAESNLDISENALHSLENDISKYNGRKISLTATLQHVRLLSKIKSFLEDKGYDIVIGKPSNRFMF
DGQVLGCDYKAAEVEADIYVIVSGGLFHALGLGLATNKPTIKLDPYLQKSEDITNDVRKILKVRYGKILQALDKRSWVII
QGVKVGQNRPNMIKYFYDKLTEKGYDVFTVTNKVLTLDILRNLDRNYIDVFLVTSCPRLPIDDLYNYEKPVLTPGEAKMI
INNSLEPYIFPW

Specific function: Unknown

COG id: COG1736

COG function: function code J; Diphthamide synthase subunit DPH2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI116686106, Length=326, Percent_Identity=26.3803680981595, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17552166, Length=334, Percent_Identity=25.748502994012, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6322088, Length=329, Percent_Identity=29.7872340425532, Blast_Score=123, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24662841, Length=332, Percent_Identity=28.3132530120482, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21356957, Length=332, Percent_Identity=28.3132530120482, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016435
- InterPro:   IPR002728
- InterPro:   IPR022428 [H]

Pfam domain/function: PF01866 Diphthamide_syn [H]

EC number: NA

Molecular weight: Translated: 38317; Mature: 38185

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYNFEEERVIKEIREKNAKRVLLQFPEGLKYFSIDIVKKLREKLPNVNFIISGEPSWGA
CCCCCHHHHHHHHHHHCCHHEEEEECCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCC
CDIAEDEAQQVNADLIIHFGHTPYTWYYPKFPTIFINAESNLDISENALHSLENDISKYN
CCCCCHHHHHCCCEEEEEECCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC
GRKISLTATLQHVRLLSKIKSFLEDKGYDIVIGKPSNRFMFDGQVLGCDYKAAEVEADIY
CCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCEEEECCCEEEEECCEEE
VIVSGGLFHALGLGLATNKPTIKLDPYLQKSEDITNDVRKILKVRYGKILQALDKRSWVI
EEEECCHHHHHHCCEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IQGVKVGQNRPNMIKYFYDKLTEKGYDVFTVTNKVLTLDILRNLDRNYIDVFLVTSCPRL
EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCEEEEEEEECCCCC
PIDDLYNYEKPVLTPGEAKMIINNSLEPYIFPW
CHHHHHCCCCCCCCCCCCEEEECCCCCCEEECC
>Mature Secondary Structure 
SYNFEEERVIKEIREKNAKRVLLQFPEGLKYFSIDIVKKLREKLPNVNFIISGEPSWGA
CCCCHHHHHHHHHHHCCHHEEEEECCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCCC
CDIAEDEAQQVNADLIIHFGHTPYTWYYPKFPTIFINAESNLDISENALHSLENDISKYN
CCCCCHHHHHCCCEEEEEECCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC
GRKISLTATLQHVRLLSKIKSFLEDKGYDIVIGKPSNRFMFDGQVLGCDYKAAEVEADIY
CCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCEEEECCCEEEEECCEEE
VIVSGGLFHALGLGLATNKPTIKLDPYLQKSEDITNDVRKILKVRYGKILQALDKRSWVI
EEEECCHHHHHHCCEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IQGVKVGQNRPNMIKYFYDKLTEKGYDVFTVTNKVLTLDILRNLDRNYIDVFLVTSCPRL
EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCEEEEEEEECCCCC
PIDDLYNYEKPVLTPGEAKMIINNSLEPYIFPW
CHHHHHCCCCCCCCCCCCEEEECCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]