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The map label for this gene is 15897208

Identifier: 15897208

GI number: 15897208

Start: 227596

End: 228060

Strand: Reverse

Name: 15897208

Synonym: SSO0264

Alternate gene names: NA

Gene position: 228060-227596 (Counterclockwise)

Preceding gene: 15897209

Following gene: 15897206

Centisome position: 7.62

GC content: 33.55

Gene sequence:

>465_bases
ATGAAAGAACTATATTTCGGCCTACATAATCTCACTAGTAATCAAAGACTCTTAGACTTTTCCAAATTAGCCTTTAATGT
AAAATACGTAAAGTATCTCGTTCTTACAAAGGTAGGCGGAACAGCAGCCCAATCTGGAGTCCCTGAAGTAAACAAACTAG
CATTTAAATACAATAAGCCTATTTTGGTTCTACCAGAACTAAAGGATGCTATAGAGTTATTAAAACCAGAAATTACACTC
CTAGTCTCACAGAATGCTGAAAAACAAATTGACTTTAATGATATGATAAAACATGATAAGATCTTGATAGTATTTTCTGG
GCTAGAAGGAGGTGGTTTTAACAAAATTGAGCAATCTCTAGGCGAATATGTAAGAATATTAGAAGATACTCAAGATCTTG
GAGCCGTGAGTCTAGCATCCTTCTTTTTATGTAAGTATTTACAACTAGTAGAAGGTAAAGTTTAA

Upstream 100 bases:

>100_bases
GTATTTTTAGGAAGTAAAGATGAGCAATATAATCAAGTAGGTGAATCTGTTCCAGTAGCCTTATCTACTGCTATAGCTAA
AGAGATTTTGGGTATCTTAA

Downstream 100 bases:

>100_bases
AAGAGAAAACAATAACCTAGTATTAAGGGCCCGTCGTCTAGCCTGGTTAGGACGTCGCCCTGACACGGCGGAGGTCCTGG
GTTCAAATCCCAGCGGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKELYFGLHNLTSNQRLLDFSKLAFNVKYVKYLVLTKVGGTAAQSGVPEVNKLAFKYNKPILVLPELKDAIELLKPEITL
LVSQNAEKQIDFNDMIKHDKILIVFSGLEGGGFNKIEQSLGEYVRILEDTQDLGAVSLASFFLCKYLQLVEGKV

Sequences:

>Translated_154_residues
MKELYFGLHNLTSNQRLLDFSKLAFNVKYVKYLVLTKVGGTAAQSGVPEVNKLAFKYNKPILVLPELKDAIELLKPEITL
LVSQNAEKQIDFNDMIKHDKILIVFSGLEGGGFNKIEQSLGEYVRILEDTQDLGAVSLASFFLCKYLQLVEGKV
>Mature_154_residues
MKELYFGLHNLTSNQRLLDFSKLAFNVKYVKYLVLTKVGGTAAQSGVPEVNKLAFKYNKPILVLPELKDAIELLKPEITL
LVSQNAEKQIDFNDMIKHDKILIVFSGLEGGGFNKIEQSLGEYVRILEDTQDLGAVSLASFFLCKYLQLVEGKV

Specific function: Unknown

COG id: COG4080

COG function: function code L; RecB-family nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.pernix APE2001 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018665 [H]

Pfam domain/function: PF09895 DUF2122 [H]

EC number: NA

Molecular weight: Translated: 17283; Mature: 17283

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELYFGLHNLTSNQRLLDFSKLAFNVKYVKYLVLTKVGGTAAQSGVPEVNKLAFKYNKP
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHEECCCC
ILVLPELKDAIELLKPEITLLVSQNAEKQIDFNDMIKHDKILIVFSGLEGGGFNKIEQSL
EEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHH
GEYVRILEDTQDLGAVSLASFFLCKYLQLVEGKV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKELYFGLHNLTSNQRLLDFSKLAFNVKYVKYLVLTKVGGTAAQSGVPEVNKLAFKYNKP
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHEECCCC
ILVLPELKDAIELLKPEITLLVSQNAEKQIDFNDMIKHDKILIVFSGLEGGGFNKIEQSL
EEEECCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHH
GEYVRILEDTQDLGAVSLASFFLCKYLQLVEGKV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]