| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15897183
Identifier: 15897183
GI number: 15897183
Start: 203519
End: 205267
Strand: Reverse
Name: 15897183
Synonym: SSO0235
Alternate gene names: NA
Gene position: 205267-203519 (Counterclockwise)
Preceding gene: 15897184
Following gene: 15897177
Centisome position: 6.86
GC content: 35.56
Gene sequence:
>1749_bases ATGGCTCAGATAGTAAATACTGAAAGGCATTCCAGACTTTTGCCTGCACCGTCAAGTTTCGAGGAAGGAGTAGTCAAATT TGGAGATAAAGAAATTAATATAGGAGGACCCTTACCAACATTAGCTAAAGATGAGAAATTAGTTAGAGTAACTCATTCAC TATGTCCAGCATGCTATAGGCTATTACCAGCTACTATATTTGAAAAAGAAGGGAAATTGTTCATAAGAAAAATATGCCCA GAACACGGAGAATTTGAGGACTTATATTACGCAGATTCTAGTCTATACTATAAGTTTGACTATTGGGAGTATGAAGGAAA AGGACCTAAAGTCCCCTATGTTGACTTGAAATCTCCCTGCCCTTATAACTGTGGATTATGCCCGATGCATCATCAACACT CAGCATTAGTTAATTTAGTGATAACAAATAGATGTGACTTATCTTGTTGGTATTGTTTCTTCTATGCTGAAAAGGCAGGA TATGTTTATGAACCTACGTTAGAGCAAATTAAGTTTATGGTAGATCAACTAAAGAAACAAGATATTACGCTTGTTATCCA AGTGACTGGAGGAGAGCCTACATTAAGGGAGGACATAATAGAAATAATAAAGATGCTTAGAGAAAATGGTGTAAAACATA TTCAATTAAATAGTTGGGGAGGCACTTTTGCTAAACTGTATTTAGAAGATCCCGATAAGGCAATTAAATACGCTAGAGCT CTTAGAGAGGCTGGAGTAAATACTGTATACATGAGTTTTGACGGTACAACTAGAAAAACTAATCCTAAGAATCATTGGGA AATTCCCTACACGTTAGAAGTATTCAGAAGAGCAGGAATGACAAGTGTTGTGCTAGTTCCTACTGTAATAAAGACAGTTA ATGACAATGATCTAGGGAATATAGTTAAGTTTGCAGCATATAATATGGATGTAGTTAGATCAGTAAACTTCCAGCCAGTG AGCTTAACCGGAATGATGAAAAGGAATATGAGAGCTAAATTCAGAATCACGATACCCGAAGTTATAAAGAACATAGAAGA ACAAACTGATGGTGAGATAACTAAGGATAGTTGGTATCCAATAGGTACTTCTGTTGTCTTCTCAAGGCTAGTTGAAGCTT TAACTGGTAAGGAGCAATTCGAAATGGCTAATCATCCTTCTTGTGGAGCTGGAACATATGTATATGTAGAATGGAGGAAT CACGAACCTCACTTCATACCAATTTCGAAGTTTATTGATTTAGAAGGTTTGCTAGAATATCTTAAAGAGAAAGAAGAAGA GTTAAGGGAAGGCGCTAATAAGGTATGGGTTGCAAGTAAAGTATTGTATAGTATAAGGAAGTTCATAGATAAAGAGCAAG GACCTAAGGACTTTGATGTATATAAGATGCTCTATAACATAATAATTCATCATAACTACGAAGCACTTGGAGAGTGGCAC TATAGAACATTATTCTTAGGAAGTATGCACTTCATGGACTTATATAATTACGATGTACAAAGAGTGATGAGATGTGATAT TCACTATGTTGTTCCGGATGGTAGAGTAATTCCATTCTGTACCTATAATGTATTAAACGATTTGTATAGAGATAAAGTAT TAAGAGAATATCAAATACCCCTTGATAAATGGACTAAGGAACATGGAGAGAACTCATTGGGCGATGCTATAAAGTATAAA CGTATTGCTTCAACCTTAGAGAATTCCGAGATCTATAAGAACACTTACAAATCCTTCCAACAGATGTGA
Upstream 100 bases:
>100_bases AAAAATACTGGATGGGATAATTTCATCGGTTGGTATTAACTGAATGTATGTAAGTCAAAGAGAATATCTTTATATATAAA GATCGCAAATCTTACTTTCA
Downstream 100 bases:
>100_bases CATATATTAATCAAAAGTATTTTTCTAATGTAGTTTTTTCTTGTTTTCTAAGCTGTTGTTTTTTATTTGGAATTAAATCT TTGAACCAAACTCTTAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MAQIVNTERHSRLLPAPSSFEEGVVKFGDKEINIGGPLPTLAKDEKLVRVTHSLCPACYRLLPATIFEKEGKLFIRKICP EHGEFEDLYYADSSLYYKFDYWEYEGKGPKVPYVDLKSPCPYNCGLCPMHHQHSALVNLVITNRCDLSCWYCFFYAEKAG YVYEPTLEQIKFMVDQLKKQDITLVIQVTGGEPTLREDIIEIIKMLRENGVKHIQLNSWGGTFAKLYLEDPDKAIKYARA LREAGVNTVYMSFDGTTRKTNPKNHWEIPYTLEVFRRAGMTSVVLVPTVIKTVNDNDLGNIVKFAAYNMDVVRSVNFQPV SLTGMMKRNMRAKFRITIPEVIKNIEEQTDGEITKDSWYPIGTSVVFSRLVEALTGKEQFEMANHPSCGAGTYVYVEWRN HEPHFIPISKFIDLEGLLEYLKEKEEELREGANKVWVASKVLYSIRKFIDKEQGPKDFDVYKMLYNIIIHHNYEALGEWH YRTLFLGSMHFMDLYNYDVQRVMRCDIHYVVPDGRVIPFCTYNVLNDLYRDKVLREYQIPLDKWTKEHGENSLGDAIKYK RIASTLENSEIYKNTYKSFQQM
Sequences:
>Translated_582_residues MAQIVNTERHSRLLPAPSSFEEGVVKFGDKEINIGGPLPTLAKDEKLVRVTHSLCPACYRLLPATIFEKEGKLFIRKICP EHGEFEDLYYADSSLYYKFDYWEYEGKGPKVPYVDLKSPCPYNCGLCPMHHQHSALVNLVITNRCDLSCWYCFFYAEKAG YVYEPTLEQIKFMVDQLKKQDITLVIQVTGGEPTLREDIIEIIKMLRENGVKHIQLNSWGGTFAKLYLEDPDKAIKYARA LREAGVNTVYMSFDGTTRKTNPKNHWEIPYTLEVFRRAGMTSVVLVPTVIKTVNDNDLGNIVKFAAYNMDVVRSVNFQPV SLTGMMKRNMRAKFRITIPEVIKNIEEQTDGEITKDSWYPIGTSVVFSRLVEALTGKEQFEMANHPSCGAGTYVYVEWRN HEPHFIPISKFIDLEGLLEYLKEKEEELREGANKVWVASKVLYSIRKFIDKEQGPKDFDVYKMLYNIIIHHNYEALGEWH YRTLFLGSMHFMDLYNYDVQRVMRCDIHYVVPDGRVIPFCTYNVLNDLYRDKVLREYQIPLDKWTKEHGENSLGDAIKYK RIASTLENSEIYKNTYKSFQQM >Mature_581_residues AQIVNTERHSRLLPAPSSFEEGVVKFGDKEINIGGPLPTLAKDEKLVRVTHSLCPACYRLLPATIFEKEGKLFIRKICPE HGEFEDLYYADSSLYYKFDYWEYEGKGPKVPYVDLKSPCPYNCGLCPMHHQHSALVNLVITNRCDLSCWYCFFYAEKAGY VYEPTLEQIKFMVDQLKKQDITLVIQVTGGEPTLREDIIEIIKMLRENGVKHIQLNSWGGTFAKLYLEDPDKAIKYARAL REAGVNTVYMSFDGTTRKTNPKNHWEIPYTLEVFRRAGMTSVVLVPTVIKTVNDNDLGNIVKFAAYNMDVVRSVNFQPVS LTGMMKRNMRAKFRITIPEVIKNIEEQTDGEITKDSWYPIGTSVVFSRLVEALTGKEQFEMANHPSCGAGTYVYVEWRNH EPHFIPISKFIDLEGLLEYLKEKEEELREGANKVWVASKVLYSIRKFIDKEQGPKDFDVYKMLYNIIIHHNYEALGEWHY RTLFLGSMHFMDLYNYDVQRVMRCDIHYVVPDGRVIPFCTYNVLNDLYRDKVLREYQIPLDKWTKEHGENSLGDAIKYKR IASTLENSEIYKNTYKSFQQM
Specific function: Unknown
COG id: COG1964
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 67650; Mature: 67518
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS01305 MOAA_NIFB_PQQE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQIVNTERHSRLLPAPSSFEEGVVKFGDKEINIGGPLPTLAKDEKLVRVTHSLCPACYR CCCCCCCCHHCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LLPATIFEKEGKLFIRKICPEHGEFEDLYYADSSLYYKFDYWEYEGKGPKVPYVDLKSPC HHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCEEEEEEEEEEECCCCCCCCEEECCCCC PYNCGLCPMHHQHSALVNLVITNRCDLSCWYCFFYAEKAGYVYEPTLEQIKFMVDQLKKQ CCCCCCCCCCCCCHHEEEEEEECCCCCEEEEEEEEECCCCCEECCHHHHHHHHHHHHCCC DITLVIQVTGGEPTLREDIIEIIKMLRENGVKHIQLNSWGGTFAKLYLEDPDKAIKYARA CEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHH LREAGVNTVYMSFDGTTRKTNPKNHWEIPYTLEVFRRAGMTSVVLVPTVIKTVNDNDLGN HHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHCCCCCHHH IVKFAAYNMDVVRSVNFQPVSLTGMMKRNMRAKFRITIPEVIKNIEEQTDGEITKDSWYP HHHHHHCCHHHHHCCCCCEEEHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCEECCCCCC IGTSVVFSRLVEALTGKEQFEMANHPSCGAGTYVYVEWRNHEPHFIPISKFIDLEGLLEY CCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEHHHHCCHHHHHHH LKEKEEELREGANKVWVASKVLYSIRKFIDKEQGPKDFDVYKMLYNIIIHHNYEALGEWH HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCHH YRTLFLGSMHFMDLYNYDVQRVMRCDIHYVVPDGRVIPFCTYNVLNDLYRDKVLREYQIP EEEEEECCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCC LDKWTKEHGENSLGDAIKYKRIASTLENSEIYKNTYKSFQQM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQIVNTERHSRLLPAPSSFEEGVVKFGDKEINIGGPLPTLAKDEKLVRVTHSLCPACYR CCCCCCCHHCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH LLPATIFEKEGKLFIRKICPEHGEFEDLYYADSSLYYKFDYWEYEGKGPKVPYVDLKSPC HHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCEEEEEEEEEEECCCCCCCCEEECCCCC PYNCGLCPMHHQHSALVNLVITNRCDLSCWYCFFYAEKAGYVYEPTLEQIKFMVDQLKKQ CCCCCCCCCCCCCHHEEEEEEECCCCCEEEEEEEEECCCCCEECCHHHHHHHHHHHHCCC DITLVIQVTGGEPTLREDIIEIIKMLRENGVKHIQLNSWGGTFAKLYLEDPDKAIKYARA CEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHHHHHH LREAGVNTVYMSFDGTTRKTNPKNHWEIPYTLEVFRRAGMTSVVLVPTVIKTVNDNDLGN HHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHCCCCCHHH IVKFAAYNMDVVRSVNFQPVSLTGMMKRNMRAKFRITIPEVIKNIEEQTDGEITKDSWYP HHHHHHCCHHHHHCCCCCEEEHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCEECCCCCC IGTSVVFSRLVEALTGKEQFEMANHPSCGAGTYVYVEWRNHEPHFIPISKFIDLEGLLEY CCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEHHHHCCHHHHHHH LKEKEEELREGANKVWVASKVLYSIRKFIDKEQGPKDFDVYKMLYNIIIHHNYEALGEWH HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCHH YRTLFLGSMHFMDLYNYDVQRVMRCDIHYVVPDGRVIPFCTYNVLNDLYRDKVLREYQIP EEEEEECCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCC LDKWTKEHGENSLGDAIKYKRIASTLENSEIYKNTYKSFQQM HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]