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The map label for this gene is 15897144

Identifier: 15897144

GI number: 15897144

Start: 166515

End: 167198

Strand: Reverse

Name: 15897144

Synonym: SSO0193

Alternate gene names: NA

Gene position: 167198-166515 (Counterclockwise)

Preceding gene: 15897145

Following gene: 15897143

Centisome position: 5.59

GC content: 35.23

Gene sequence:

>684_bases
ATGATTCAAGAGGAACTGGTACAGATACAGGAGTTAAACGAAGAGATAGGACGGTTACTAATAGAAATAGCTAGAAAATC
CATTAAGGAAGAATTCAAGTTAGACAAGTTGGATTTGAGTAAGTACGATAATCCCATTTTAGATAAAAAAGGTCTAGCCT
TTGTGACGCTAGAGAAAATTGCGTATAATACGAGTTCTTTAAGAGGCTGTATAGGCTATGTTGAGGCAGTTGCTCCTTTG
AAGCAGATAGCTGCGTCTGCAGCCAAAGCTGCCGCTTTTTCAGATCCAAGATTTAATCCGCTGCAAGAAGATGAATTAGC
GAATATAATTATCGAGGTTACAGTGTTAACAAAACCAGAAGAAATAAAGGTAAAAGATAGGTGGGATTTACCCAAGATTA
TAAAAGTTGGGGAAGATGGTTTAATAGTTGAGAAAGGGATTCTCCACAGCGGCCTTTTATTACCTCAAGTTCCTATGGAA
TATTGCTGGGATGAAGAAACGTTCCTAGCGGAAACTTGCATTAAGGCTTCTTTAGAACCAGATTGTTGGTTAGATAGCTC
TGTTAGAATTAAAAGATTTCATGGAATAATATTTAAAGAAACTAAACCAAATGGAAGTGATATTATTGTAATAAAGCCTA
GCGATATTAAATGTAAGCTAAATGAATTAATAAATAATTTATGA

Upstream 100 bases:

>100_bases
CCTAAATGTAAGAAAGAATATTGGAAAGGTAGGCATTGGAGAACAATTGAAGAGATAATAATTAAAGCTAATTCTGAGTT
AGTAAAATTGGAAACTAAAA

Downstream 100 bases:

>100_bases
AGGTATTATCAGCTAAGAGGACTGACTTTTATAATGACGTACATACGGTAACTCTTGGAAATAAAACTCTTTATTCCTAA
ATAAATACTTAAAAAACATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIQEELVQIQELNEEIGRLLIEIARKSIKEEFKLDKLDLSKYDNPILDKKGLAFVTLEKIAYNTSSLRGCIGYVEAVAPL
KQIAASAAKAAAFSDPRFNPLQEDELANIIIEVTVLTKPEEIKVKDRWDLPKIIKVGEDGLIVEKGILHSGLLLPQVPME
YCWDEETFLAETCIKASLEPDCWLDSSVRIKRFHGIIFKETKPNGSDIIVIKPSDIKCKLNELINNL

Sequences:

>Translated_227_residues
MIQEELVQIQELNEEIGRLLIEIARKSIKEEFKLDKLDLSKYDNPILDKKGLAFVTLEKIAYNTSSLRGCIGYVEAVAPL
KQIAASAAKAAAFSDPRFNPLQEDELANIIIEVTVLTKPEEIKVKDRWDLPKIIKVGEDGLIVEKGILHSGLLLPQVPME
YCWDEETFLAETCIKASLEPDCWLDSSVRIKRFHGIIFKETKPNGSDIIVIKPSDIKCKLNELINNL
>Mature_227_residues
MIQEELVQIQELNEEIGRLLIEIARKSIKEEFKLDKLDLSKYDNPILDKKGLAFVTLEKIAYNTSSLRGCIGYVEAVAPL
KQIAASAAKAAAFSDPRFNPLQEDELANIIIEVTVLTKPEEIKVKDRWDLPKIIKVGEDGLIVEKGILHSGLLLPQVPME
YCWDEETFLAETCIKASLEPDCWLDSSVRIKRFHGIIFKETKPNGSDIIVIKPSDIKCKLNELINNL

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y193_SULSO (Q980T4)

Other databases:

- EMBL:   AE006641
- PIR:   D90160
- RefSeq:   NP_341749.1
- ProteinModelPortal:   Q980T4
- SMR:   Q980T4
- GeneID:   1455349
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0193
- NMPDR:   fig|273057.1.peg.172
- HOGENOM:   HBG624682
- OMA:   TSLRGCI
- ProtClustDB:   CLSK802607
- BioCyc:   SSOL273057:SSO0193-MONOMER
- HAMAP:   MF_00645
- InterPro:   IPR002733
- TIGRFAMs:   TIGR00296

Pfam domain/function: PF01871 AMMECR1

EC number: NA

Molecular weight: Translated: 25617; Mature: 25617

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQEELVQIQELNEEIGRLLIEIARKSIKEEFKLDKLDLSKYDNPILDKKGLAFVTLEKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEHHHH
AYNTSSLRGCIGYVEAVAPLKQIAASAAKAAAFSDPRFNPLQEDELANIIIEVTVLTKPE
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEEEECCCC
EIKVKDRWDLPKIIKVGEDGLIVEKGILHSGLLLPQVPMEYCWDEETFLAETCIKASLEP
CEEECCCCCCHHHHHCCCCCEEEECCHHHCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCC
DCWLDSSVRIKRFHGIIFKETKPNGSDIIVIKPSDIKCKLNELINNL
CCCCCCCCEEEEECCEEEEECCCCCCEEEEECCCCCEEHHHHHHHCC
>Mature Secondary Structure
MIQEELVQIQELNEEIGRLLIEIARKSIKEEFKLDKLDLSKYDNPILDKKGLAFVTLEKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCEEEEHHHH
AYNTSSLRGCIGYVEAVAPLKQIAASAAKAAAFSDPRFNPLQEDELANIIIEVTVLTKPE
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEEEEEEEECCCC
EIKVKDRWDLPKIIKVGEDGLIVEKGILHSGLLLPQVPMEYCWDEETFLAETCIKASLEP
CEEECCCCCCHHHHHCCCCCEEEECCHHHCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCC
DCWLDSSVRIKRFHGIIFKETKPNGSDIIVIKPSDIKCKLNELINNL
CCCCCCCCEEEEECCEEEEECCCCCCEEEEECCCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726