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The map label for this gene is ef1B [H]

Identifier: 15897128

GI number: 15897128

Start: 147003

End: 147278

Strand: Direct

Name: ef1B [H]

Synonym: SSO5345

Alternate gene names: 15897128

Gene position: 147003-147278 (Clockwise)

Preceding gene: 15897127

Following gene: 15897129

Centisome position: 4.91

GC content: 33.7

Gene sequence:

>276_bases
ATGACAGATGTGTTAGTTGTCCTTAAAGTCTTTCCCGATAGTGATGAAGTTAATTTAGATAATTTGTACACAGATATTAG
CAGTAAATTGCCTAAAGAATATAAGATTATTAGAAAGGAAACTGAACCTATAGCTTTTGGTCTAAACGCGCTAATCCTAT
ATGTTCAAATGCCTGAGCAAACTGAAGGTGGGACAGACAATTTAGAAGAAGTAGTAAATAATATACAAGGAGTTAGTCAT
GCCGAAGTAGTAGGGATAACAAGATTAGGATTCTAA

Upstream 100 bases:

>100_bases
GGTGAAGTATTAATAAGAAGAGATCACATGTGTAGAAAACAAGGAGCAGAATATATTTGTCCAAATTGTGGATTTAAGGG
ACCCTAAGGGGTAGCTTAAA

Downstream 100 bases:

>100_bases
TAAACTCTTTGGTACGTTAGTTCTTATATATCCTTTATACGCTAAAATATTTTGGAGATAAAAATTGAGCGCTAGTTCTG
GAGAGGAACAGAAGCCGCAA

Product: elongation factor 1-beta

Products: NA

Alternate protein names: EF-1-beta; aEF-1beta [H]

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MTDVLVVLKVFPDSDEVNLDNLYTDISSKLPKEYKIIRKETEPIAFGLNALILYVQMPEQTEGGTDNLEEVVNNIQGVSH
AEVVGITRLGF

Sequences:

>Translated_91_residues
MTDVLVVLKVFPDSDEVNLDNLYTDISSKLPKEYKIIRKETEPIAFGLNALILYVQMPEQTEGGTDNLEEVVNNIQGVSH
AEVVGITRLGF
>Mature_90_residues
TDVLVVLKVFPDSDEVNLDNLYTDISSKLPKEYKIIRKETEPIAFGLNALILYVQMPEQTEGGTDNLEEVVNNIQGVSHA
EVVGITRLGF

Specific function: Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA [H]

COG id: COG2092

COG function: function code J; Translation elongation factor EF-1beta

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-1-beta/EF-1-delta family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014717
- InterPro:   IPR004542
- InterPro:   IPR014038 [H]

Pfam domain/function: PF00736 EF1_GNE [H]

EC number: NA

Molecular weight: Translated: 10137; Mature: 10005

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVLVVLKVFPDSDEVNLDNLYTDISSKLPKEYKIIRKETEPIAFGLNALILYVQMPEQ
CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCEECCCCEEEEEECCCC
TEGGTDNLEEVVNNIQGVSHAEVVGITRLGF
CCCCCCCHHHHHHHHCCCCCHHEEEEEECCC
>Mature Secondary Structure 
TDVLVVLKVFPDSDEVNLDNLYTDISSKLPKEYKIIRKETEPIAFGLNALILYVQMPEQ
CCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCEECCCCEEEEEECCCC
TEGGTDNLEEVVNNIQGVSHAEVVGITRLGF
CCCCCCCHHHHHHHHCCCCCHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA