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The map label for this gene is lysW

Identifier: 15897109

GI number: 15897109

Start: 132412

End: 132582

Strand: Direct

Name: lysW

Synonym: SSO5317

Alternate gene names: 15897109

Gene position: 132412-132582 (Clockwise)

Preceding gene: 15897108

Following gene: 15897110

Centisome position: 4.43

GC content: 40.35

Gene sequence:

>171_bases
ATGGTAAATCTAAAATGTCCTATCTGTGGTGGAGAAATAACTGTAGAAGACGATGCGTTACCAGGAGAACTTGTAGAACA
TGAATGCGGAGCTCAATTAGAAGTTGTAAAACAAAACGGCAAATTGTCACTTAGACTAGCAGAGCAAATAGGTGAGGATT
GGGGAGAGTGA

Upstream 100 bases:

>100_bases
AAATAGTACTATTATCCTTAGAACCTGGTTCTAAAATCGTACCACTTATTACTAAAAACTTTTTCTACACAAAACTAAGT
TAGTATCTAACTGACCTTCA

Downstream 100 bases:

>100_bases
AAATAGGAATTCTATATGACATGCCCAGATGGGAGGAAAAAAACCTTATTGAAGAGGGGAAAAAATTAGGTTATCAAGTT
GCTACTATATATAGTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: AAA carrier protein lysW

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MVNLKCPICGGEITVEDDALPGELVEHECGAQLEVVKQNGKLSLRLAEQIGEDWGE

Sequences:

>Translated_56_residues
MVNLKCPICGGEITVEDDALPGELVEHECGAQLEVVKQNGKLSLRLAEQIGEDWGE
>Mature_56_residues
MVNLKCPICGGEITVEDDALPGELVEHECGAQLEVVKQNGKLSLRLAEQIGEDWGE

Specific function: Carries the different intermediates in the biosynthesis of L-lysine, from alpha-aminodipate to the final lysine residue

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TFIIB-type zinc finger

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LYSW_SULSO (Q980W8)

Other databases:

- EMBL:   AE006641
- EMBL:   BK000545
- PIR:   A90156
- RefSeq:   NP_341714.1
- ProteinModelPortal:   Q980W8
- GeneID:   1453331
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO5317
- NMPDR:   fig|273057.1.peg.137
- HOGENOM:   HBG728335
- OMA:   EIVEHEC
- ProtClustDB:   CLSK802585
- BioCyc:   SSOL273057:SSO5317-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6065; Mature: 6065

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: PS51134 ZF_TFIIB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLKCPICGGEITVEDDALPGELVEHECGAQLEVVKQNGKLSLRLAEQIGEDWGE
CCCCCCCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHCCCC
>Mature Secondary Structure
MVNLKCPICGGEITVEDDALPGELVEHECGAQLEVVKQNGKLSLRLAEQIGEDWGE
CCCCCCCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726; 12042311