Click here to switch to the map view.

The map label for this gene is 15897070

Identifier: 15897070

GI number: 15897070

Start: 89415

End: 90317

Strand: Direct

Name: 15897070

Synonym: SSO0110

Alternate gene names: NA

Gene position: 89415-90317 (Clockwise)

Preceding gene: 15897069

Following gene: 15897071

Centisome position: 2.99

GC content: 33.55

Gene sequence:

>903_bases
ATGCAGAATCTCTCGCCTACGCAAAGGGAAATATTGTTAGCACTTACTGATCTATATAATAGGCAAAAAAGAATGATAAA
AAGTAAGGAAGTAGCTGACATTATAGGAAAAGATGAGGGAACAGTAAGGAACATTATACTAAGCTTAAAAGTATTAGGCC
TAGTTGAATCGAAACCCGGACCTAATGGAGGTTACATGCCAACACTAAAAGCATATGAAATTATTAATAATCCTACACTA
ACTCCAATTTTGGATAAACTAAATCTCTATAAAGGGATGATAGAAACTGATATAAAAGTAGAAAATATTGAAATAATTGA
TATTACTAACCCTTCAGCGAATAGGGTTCTCTTAAAGGTAGAGGGAGATCTAAGGAAATTAAAGATAGGAGATGCTGTAC
GGTTAGGTCCTACACCCTATAGTAGGCTGGTTATAGAAGGATTGATATTACACTTAGATGAAAATAGTAAAGAAATCGTA
GTAGACGTGAAAAGAATGATAAGTATCCCTAAGGAAAAAGTCAAAAATCTTATCTCTAAGAAACTCATAGCGTTAAAACC
AGAAACTAGCTTAAGAGAAGCCTCCATGATATTCTATAAGGAAGCAATAAGAGGTGCGCCTGTTATCAACCAAGACGAAA
AAGTTGTAGGGATTCTTACTACTGCAGATATAATTAAAGCCTTCTTTGAAGGAAACTATACAGCTAAAGTATCAGACTAT
ATGAAGACCAATGTAATCAGTATAAATGAAAATGAAGACTTGCTAGATGCAATTAGGAAAATGATAATTTATAATGTCGG
TAGATTGTTGGTACTTGATAGTAATAATAAAGCTGTTGGTATTGTAACCAGAACCGATATTTTAAGATCAATTGCTGGTC
TAGAAGGTTTGTGGACAACTTGA

Upstream 100 bases:

>100_bases
AAGAGGTATTTAACGTAAATAAGAAGGTATTGAATAAGGTTTTGGGTGTAAAGGTATAAGCATAGATATTTTAAACTACT
AAATAAATTATAATTGAGTT

Downstream 100 bases:

>100_bases
AAGAGAAATGTGGAATTATTTGTAATAACACTTTCTATGAGTTAAAAAATATAAGTCGTACAGAATACGAATTTATTTGC
GATCCGTCTGATTTTTACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MQNLSPTQREILLALTDLYNRQKRMIKSKEVADIIGKDEGTVRNIILSLKVLGLVESKPGPNGGYMPTLKAYEIINNPTL
TPILDKLNLYKGMIETDIKVENIEIIDITNPSANRVLLKVEGDLRKLKIGDAVRLGPTPYSRLVIEGLILHLDENSKEIV
VDVKRMISIPKEKVKNLISKKLIALKPETSLREASMIFYKEAIRGAPVINQDEKVVGILTTADIIKAFFEGNYTAKVSDY
MKTNVISINENEDLLDAIRKMIIYNVGRLLVLDSNNKAVGIVTRTDILRSIAGLEGLWTT

Sequences:

>Translated_300_residues
MQNLSPTQREILLALTDLYNRQKRMIKSKEVADIIGKDEGTVRNIILSLKVLGLVESKPGPNGGYMPTLKAYEIINNPTL
TPILDKLNLYKGMIETDIKVENIEIIDITNPSANRVLLKVEGDLRKLKIGDAVRLGPTPYSRLVIEGLILHLDENSKEIV
VDVKRMISIPKEKVKNLISKKLIALKPETSLREASMIFYKEAIRGAPVINQDEKVVGILTTADIIKAFFEGNYTAKVSDY
MKTNVISINENEDLLDAIRKMIIYNVGRLLVLDSNNKAVGIVTRTDILRSIAGLEGLWTT
>Mature_300_residues
MQNLSPTQREILLALTDLYNRQKRMIKSKEVADIIGKDEGTVRNIILSLKVLGLVESKPGPNGGYMPTLKAYEIINNPTL
TPILDKLNLYKGMIETDIKVENIEIIDITNPSANRVLLKVEGDLRKLKIGDAVRLGPTPYSRLVIEGLILHLDENSKEIV
VDVKRMISIPKEKVKNLISKKLIALKPETSLREASMIFYKEAIRGAPVINQDEKVVGILTTADIIKAFFEGNYTAKVSDY
MKTNVISINENEDLLDAIRKMIIYNVGRLLVLDSNNKAVGIVTRTDILRSIAGLEGLWTT

Specific function: Unknown

COG id: COG2524

COG function: function code K; Predicted transcriptional regulator, contains C-terminal CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001807
- InterPro:   IPR000644
- InterPro:   IPR016436
- InterPro:   IPR005104
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00571 CBS; PF03444 DUF293 [H]

EC number: NA

Molecular weight: Translated: 33522; Mature: 33522

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLSPTQREILLALTDLYNRQKRMIKSKEVADIIGKDEGTVRNIILSLKVLGLVESKPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCC
PNGGYMPTLKAYEIINNPTLTPILDKLNLYKGMIETDIKVENIEIIDITNPSANRVLLKV
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCEEEEEE
EGDLRKLKIGDAVRLGPTPYSRLVIEGLILHLDENSKEIVVDVKRMISIPKEKVKNLISK
CCCEEEEEECCEEEECCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH
KLIALKPETSLREASMIFYKEAIRGAPVINQDEKVVGILTTADIIKAFFEGNYTAKVSDY
HHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEHHH
MKTNVISINENEDLLDAIRKMIIYNVGRLLVLDSNNKAVGIVTRTDILRSIAGLEGLWTT
HHCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQNLSPTQREILLALTDLYNRQKRMIKSKEVADIIGKDEGTVRNIILSLKVLGLVESKPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCC
PNGGYMPTLKAYEIINNPTLTPILDKLNLYKGMIETDIKVENIEIIDITNPSANRVLLKV
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCCEEEEEE
EGDLRKLKIGDAVRLGPTPYSRLVIEGLILHLDENSKEIVVDVKRMISIPKEKVKNLISK
CCCEEEEEECCEEEECCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH
KLIALKPETSLREASMIFYKEAIRGAPVINQDEKVVGILTTADIIKAFFEGNYTAKVSDY
HHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEHHH
MKTNVISINENEDLLDAIRKMIIYNVGRLLVLDSNNKAVGIVTRTDILRSIAGLEGLWTT
HHCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]