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The map label for this gene is 15897032

Identifier: 15897032

GI number: 15897032

Start: 54626

End: 55480

Strand: Reverse

Name: 15897032

Synonym: SSO0066

Alternate gene names: NA

Gene position: 55480-54626 (Counterclockwise)

Preceding gene: 15897033

Following gene: 15897031

Centisome position: 1.85

GC content: 34.74

Gene sequence:

>855_bases
ATGAGGAGATTACCAGCTGTTGCAGGTTCTTTTTATGAATCAGATCCTAAAAAACTTAAAATGCAGATTGAATGGTCATT
CAGACACAATATAGGTCCCAGAGATATTCCTAAACAATCTTACGAGAAGAAGAAAAGAGATAATTTATTTTTTATCGTAC
CACATGCTGGATATATTTATAGTGGTCCAGTTGCAGCTCACTCATATTATTATTTAGCTTCAGAAGGTAAGCCAGACGTT
GTGATAATATTAGGTCCTAATCATACTGGTTTAGGTTCTTATGTTTCAGCTTGGCCTAAGGGAGAATGGGAAACTCCATT
AGGTAGCGTAAAAGTAGATGAAGAGGTTCTTATGCAATTAGTTATGGAATCTGAAGTAATAGATCTGGAAGAAAAGTCAC
ACTTATACGAACATTCAATTGAGGTTCAATTACCTTTTTTGCAATACTTTTTTGATGATAACTTTAAGATAGTTCCAATT
GTTATTATGATGCAAACGCCAGAGATTGCTGAATTCCTAGCAGATGCTATTTATAAGGTTATACAAAAGTATTCGGATAA
GGATATAGTGGTATTGGCTAGTAGTGATATGAATCACTATGACCCCCATGAAATTACAATGAAAAAGGACGAGGAAGCAA
TAGAAAAAATTCAGCAATTAGATTATAGAGGTTTATATGAGGTTGTAGAAGGCAAGGATGTTACTTTATGCGGTTATGGT
CCTATAATGGTTAGTCTAATTCTAGCTAAGAAGTTAGGTAAAAAAGCCTATATTTTAAAACATGCAACTTCTGGTGATAC
TTCGGGACCTAAAGATTCAGTTGTGGGTTATCTTGCAGCGCGGTTTGGAAGTTAA

Upstream 100 bases:

>100_bases
ATTGGGCATTAGCAAGGCAGATACTCAGAGAAAGAAGAGTAATTCCTCCAGATGGTGATTTGGCAGTACCAGTAAGTGAG
TTCGAGATGAGGCTTGTTCA

Downstream 100 bases:

>100_bases
AGTTCCGTTTCTGGGAATCCCTCTTAAAGGAGTAAATAATCCTATTCTAGTGCTTGATGGAATTATAGAACCATTAAACA
TTTTTGTAAATACTGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRRLPAVAGSFYESDPKKLKMQIEWSFRHNIGPRDIPKQSYEKKKRDNLFFIVPHAGYIYSGPVAAHSYYYLASEGKPDV
VIILGPNHTGLGSYVSAWPKGEWETPLGSVKVDEEVLMQLVMESEVIDLEEKSHLYEHSIEVQLPFLQYFFDDNFKIVPI
VIMMQTPEIAEFLADAIYKVIQKYSDKDIVVLASSDMNHYDPHEITMKKDEEAIEKIQQLDYRGLYEVVEGKDVTLCGYG
PIMVSLILAKKLGKKAYILKHATSGDTSGPKDSVVGYLAARFGS

Sequences:

>Translated_284_residues
MRRLPAVAGSFYESDPKKLKMQIEWSFRHNIGPRDIPKQSYEKKKRDNLFFIVPHAGYIYSGPVAAHSYYYLASEGKPDV
VIILGPNHTGLGSYVSAWPKGEWETPLGSVKVDEEVLMQLVMESEVIDLEEKSHLYEHSIEVQLPFLQYFFDDNFKIVPI
VIMMQTPEIAEFLADAIYKVIQKYSDKDIVVLASSDMNHYDPHEITMKKDEEAIEKIQQLDYRGLYEVVEGKDVTLCGYG
PIMVSLILAKKLGKKAYILKHATSGDTSGPKDSVVGYLAARFGS
>Mature_284_residues
MRRLPAVAGSFYESDPKKLKMQIEWSFRHNIGPRDIPKQSYEKKKRDNLFFIVPHAGYIYSGPVAAHSYYYLASEGKPDV
VIILGPNHTGLGSYVSAWPKGEWETPLGSVKVDEEVLMQLVMESEVIDLEEKSHLYEHSIEVQLPFLQYFFDDNFKIVPI
VIMMQTPEIAEFLADAIYKVIQKYSDKDIVVLASSDMNHYDPHEITMKKDEEAIEKIQQLDYRGLYEVVEGKDVTLCGYG
PIMVSLILAKKLGKKAYILKHATSGDTSGPKDSVVGYLAARFGS

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family

Homologues:

Organism=Homo sapiens, GI7705720, Length=305, Percent_Identity=26.2295081967213, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI32566861, Length=266, Percent_Identity=24.812030075188, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25146594, Length=266, Percent_Identity=24.812030075188, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6322467, Length=211, Percent_Identity=25.5924170616114, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357419, Length=307, Percent_Identity=27.6872964169381, Blast_Score=81, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y066_SULSO (P95994)

Other databases:

- EMBL:   Y08257
- EMBL:   AE006641
- PIR:   S75422
- RefSeq:   NP_341637.1
- ProteinModelPortal:   P95994
- SMR:   P95994
- GeneID:   1455318
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0066
- NMPDR:   fig|273057.1.peg.60
- HOGENOM:   HBG575564
- OMA:   GPNHTGY
- PhylomeDB:   P95994
- ProtClustDB:   CLSK883599
- BioCyc:   SSOL273057:SSO0066-MONOMER
- HAMAP:   MF_00055
- InterPro:   IPR020619
- InterPro:   IPR002737
- PANTHER:   PTHR11060

Pfam domain/function: PF01875 Memo

EC number: NA

Molecular weight: Translated: 32192; Mature: 32192

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLPAVAGSFYESDPKKLKMQIEWSFRHNIGPRDIPKQSYEKKKRDNLFFIVPHAGYIY
CCCCCCHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCEEE
SGPVAAHSYYYLASEGKPDVVIILGPNHTGLGSYVSAWPKGEWETPLGSVKVDEEVLMQL
CCCCHHCEEEEEECCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEECHHHHHHH
VMESEVIDLEEKSHLYEHSIEVQLPFLQYFFDDNFKIVPIVIMMQTPEIAEFLADAIYKV
HHHHHHCCCHHHHHHHHCCEEEEEHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHH
IQKYSDKDIVVLASSDMNHYDPHEITMKKDEEAIEKIQQLDYRGLYEVVEGKDVTLCGYG
HHHCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHCCCCEEEECCH
PIMVSLILAKKLGKKAYILKHATSGDTSGPKDSVVGYLAARFGS
HHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRLPAVAGSFYESDPKKLKMQIEWSFRHNIGPRDIPKQSYEKKKRDNLFFIVPHAGYIY
CCCCCCHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCEEE
SGPVAAHSYYYLASEGKPDVVIILGPNHTGLGSYVSAWPKGEWETPLGSVKVDEEVLMQL
CCCCHHCEEEEEECCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEECHHHHHHH
VMESEVIDLEEKSHLYEHSIEVQLPFLQYFFDDNFKIVPIVIMMQTPEIAEFLADAIYKV
HHHHHHCCCHHHHHHHHCCEEEEEHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHH
IQKYSDKDIVVLASSDMNHYDPHEITMKKDEEAIEKIQQLDYRGLYEVVEGKDVTLCGYG
HHHCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHCCCCEEEECCH
PIMVSLILAKKLGKKAYILKHATSGDTSGPKDSVVGYLAARFGS
HHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726