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The map label for this gene is hypE [H]

Identifier: 15897023

GI number: 15897023

Start: 46297

End: 47328

Strand: Direct

Name: hypE [H]

Synonym: SSO0052

Alternate gene names: 15897023

Gene position: 46297-47328 (Clockwise)

Preceding gene: 15897020

Following gene: 15897024

Centisome position: 1.55

GC content: 35.95

Gene sequence:

>1032_bases
TTGTATTCTTTATATAAGTCCTTAACCTCAACTATAACATTAGTCATATATGCTAATTATTTCATAATAGTTAATGTGAA
TTTCGGTAAAGTTCCTATCAATAAATTTATTTATAATTTACCAATAGGGGACTGTCTCACTTGCCCATCCATAGGTGAGG
ACGCTGCAGTTCTTGAGGCTAAAGACAAATATTTGATAGTACATTCAGATCCAATTACGGAGGCTAAGAGTGACAGTGGC
TTTCTTTCAATTGCGGTTGCATGTAACGATATAAATATGAAAGGGGCTCAATGCAGATGGGTAAATAGTATCATTTTACT
TTCAGATATTTCACACTTAAATGCTACAATTTCTGCAATATCAGAAGCGTGTAACTTAATAGGCTGTAAAGTTGTAGGTG
GCCATACAGAGGTCTCGGATAAAGTTAAACAAGACATTATAATTACTACTGCAATTGGTGTTTCTAATAAGTTCTTGAGT
TATAAGAATGTAAAAGAGGGCATGAAAGTTGTACTGGTCGGCAGTCCTGGAATAGAAGGAACGTGGATCTTGGCTAAAGA
TTATGACCAGTTGTTGTTAGAAAAAGGTATAAGCAGGGAGATTATCGAAAAGGCAAAGGAGTTTAAGAAGGATATAGTAG
TTCAACCGAAGGCTTTAAGTATTTTAGATTACGTGGTTGCAATGCACGATGCTACTGAAGGAGGAATAATGCAAGCGATG
CTTGAGGTCGCAAAAGCCAGTGGTTATACTGTTTCGATTAATTTAGATAAGATTGTGTTGAGACGTGAGACGAAAATTAT
AACTAAAGCGTTAAACATTGATCCTTTAAGATTAATCTCTTCTGGGTCTTTTATCGCAGTATCTAACACTCCGGAAAAGA
TTCTTGAGAGGATAAGTGAGGCATATATAATAGGTGAGATAAAAAGAGGAGATCCGGTTTTAGAGATTAAAGGTGTTGGA
ACATTTAATCAAGATTTCGAGGAGGAATTGGTCAAGTTTGAAAGTAATTATCTTGGCTGGGGGAAGGGGTAA

Upstream 100 bases:

>100_bases
TTTCACAGTTGTTGTCTTCCCTGCTCCATTTGGCCCGAGCAATGAAAATATTTCGCCTTTATAAACTGTAAACGAGATCC
CCCTTAATACTTCTTTATCC

Downstream 100 bases:

>100_bases
AAGAATAACGCTATTTAAACCGTTCTTAGTAGTTTGCGGTAAACCGCTAATTTCATGGGCTTTTGACGCGGTAAATAAGT
TATCTGACAAGGTATATTTA

Product: hydrogenase expression/formation protein (hypE)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MYSLYKSLTSTITLVIYANYFIIVNVNFGKVPINKFIYNLPIGDCLTCPSIGEDAAVLEAKDKYLIVHSDPITEAKSDSG
FLSIAVACNDINMKGAQCRWVNSIILLSDISHLNATISAISEACNLIGCKVVGGHTEVSDKVKQDIIITTAIGVSNKFLS
YKNVKEGMKVVLVGSPGIEGTWILAKDYDQLLLEKGISREIIEKAKEFKKDIVVQPKALSILDYVVAMHDATEGGIMQAM
LEVAKASGYTVSINLDKIVLRRETKIITKALNIDPLRLISSGSFIAVSNTPEKILERISEAYIIGEIKRGDPVLEIKGVG
TFNQDFEEELVKFESNYLGWGKG

Sequences:

>Translated_343_residues
MYSLYKSLTSTITLVIYANYFIIVNVNFGKVPINKFIYNLPIGDCLTCPSIGEDAAVLEAKDKYLIVHSDPITEAKSDSG
FLSIAVACNDINMKGAQCRWVNSIILLSDISHLNATISAISEACNLIGCKVVGGHTEVSDKVKQDIIITTAIGVSNKFLS
YKNVKEGMKVVLVGSPGIEGTWILAKDYDQLLLEKGISREIIEKAKEFKKDIVVQPKALSILDYVVAMHDATEGGIMQAM
LEVAKASGYTVSINLDKIVLRRETKIITKALNIDPLRLISSGSFIAVSNTPEKILERISEAYIIGEIKRGDPVLEIKGVG
TFNQDFEEELVKFESNYLGWGKG
>Mature_343_residues
MYSLYKSLTSTITLVIYANYFIIVNVNFGKVPINKFIYNLPIGDCLTCPSIGEDAAVLEAKDKYLIVHSDPITEAKSDSG
FLSIAVACNDINMKGAQCRWVNSIILLSDISHLNATISAISEACNLIGCKVVGGHTEVSDKVKQDIIITTAIGVSNKFLS
YKNVKEGMKVVLVGSPGIEGTWILAKDYDQLLLEKGISREIIEKAKEFKKDIVVQPKALSILDYVVAMHDATEGGIMQAM
LEVAKASGYTVSINLDKIVLRRETKIITKALNIDPLRLISSGSFIAVSNTPEKILERISEAYIIGEIKRGDPVLEIKGVG
TFNQDFEEELVKFESNYLGWGKG

Specific function: May be involved in the maturation of the nifE hydrogenase [H]

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 37590; Mature: 37590

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSLYKSLTSTITLVIYANYFIIVNVNFGKVPINKFIYNLPIGDCLTCPSIGEDAAVLEA
CCHHHHHHHHHEEEEEEEEEEEEEEEECCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEC
KDKYLIVHSDPITEAKSDSGFLSIAVACNDINMKGAQCRWVNSIILLSDISHLNATISAI
CCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEECHHHHHHHHHHH
SEACNLIGCKVVGGHTEVSDKVKQDIIITTAIGVSNKFLSYKNVKEGMKVVLVGSPGIEG
HHHHHHEEEEEECCCCHHHHHHHHCEEEEEEECCCCCHHHHHCCCCCCEEEEEECCCCCE
TWILAKDYDQLLLEKGISREIIEKAKEFKKDIVVQPKALSILDYVVAMHDATEGGIMQAM
EEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
LEVAKASGYTVSINLDKIVLRRETKIITKALNIDPLRLISSGSFIAVSNTPEKILERISE
HHHHHCCCCEEEEEHHHEEEHHHHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHH
AYIIGEIKRGDPVLEIKGVGTFNQDFEEELVKFESNYLGWGKG
EEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYSLYKSLTSTITLVIYANYFIIVNVNFGKVPINKFIYNLPIGDCLTCPSIGEDAAVLEA
CCHHHHHHHHHEEEEEEEEEEEEEEEECCCCCHHHEEEECCCCCCCCCCCCCCCCEEEEC
KDKYLIVHSDPITEAKSDSGFLSIAVACNDINMKGAQCRWVNSIILLSDISHLNATISAI
CCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEEECHHHHHHHHHHH
SEACNLIGCKVVGGHTEVSDKVKQDIIITTAIGVSNKFLSYKNVKEGMKVVLVGSPGIEG
HHHHHHEEEEEECCCCHHHHHHHHCEEEEEEECCCCCHHHHHCCCCCCEEEEEECCCCCE
TWILAKDYDQLLLEKGISREIIEKAKEFKKDIVVQPKALSILDYVVAMHDATEGGIMQAM
EEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
LEVAKASGYTVSINLDKIVLRRETKIITKALNIDPLRLISSGSFIAVSNTPEKILERISE
HHHHHCCCCEEEEEHHHEEEHHHHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHH
AYIIGEIKRGDPVLEIKGVGTFNQDFEEELVKFESNYLGWGKG
EEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1526470 [H]