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The map label for this gene is 15893289

Identifier: 15893289

GI number: 15893289

Start: 1261666

End: 1261965

Strand: Reverse

Name: 15893289

Synonym: RC1366

Alternate gene names: NA

Gene position: 1261965-1261666 (Counterclockwise)

Preceding gene: 15893290

Following gene: 15893285

Centisome position: 99.46

GC content: 30.33

Gene sequence:

>300_bases
TTGGGAAAATACGATTTAGCTTTAGAAGCTTATAATAAGGCAATCGAAGTAGATCCAAGTCATCCTTATGCTTATAACAA
TAAAGCAGAAATATTAAGAAAGCTTGAAAAATACGAACTAGCACTTGAAGCATACAATAAAGCAATTGAAATTGATCCTA
ATTATTCCGATGCTTATTTTAATAAGAGTAAATTATTCGATGAACTTGGAAATTACGAAGTAGCTCTTGAGGCATATGAT
AGAGCACTCACATATAGGCATGATGACGATTTAGATTATTCTGACATATATATAATATAG

Upstream 100 bases:

>100_bases
GAAAAATATGAGTTGGCCCTTGAAGTTTATAACAAAGCAATTGCACTAAACTCTAATCATTTTCAGGCTTATCGTAATAA
AGGAGCGGTATTAAATTCAG

Downstream 100 bases:

>100_bases
GAACAATTTTGAGTAGGCTTCAAAAATATGATTTAGCTGTTAAAATGTATAATAAAACAATACAGCTTAATCCTGATGAT
TTTAGAGCTTACGTGAATAA

Product: putative O-linked GlcNAc transferase

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Protein; TPR Repeat-Containing ; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Peptidase; Conjugative Transfer Protein TraG; O-Linked GlcNAc Transferase; Peptidase S

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MGKYDLALEAYNKAIEVDPSHPYAYNNKAEILRKLEKYELALEAYNKAIEIDPNYSDAYFNKSKLFDELGNYEVALEAYD
RALTYRHDDDLDYSDIYII

Sequences:

>Translated_99_residues
MGKYDLALEAYNKAIEVDPSHPYAYNNKAEILRKLEKYELALEAYNKAIEIDPNYSDAYFNKSKLFDELGNYEVALEAYD
RALTYRHDDDLDYSDIYII
>Mature_98_residues
GKYDLALEAYNKAIEVDPSHPYAYNNKAEILRKLEKYELALEAYNKAIEIDPNYSDAYFNKSKLFDELGNYEVALEAYDR
ALTYRHDDDLDYSDIYII

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11632; Mature: 11501

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKYDLALEAYNKAIEVDPSHPYAYNNKAEILRKLEKYELALEAYNKAIEIDPNYSDAYF
CCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHC
NKSKLFDELGNYEVALEAYDRALTYRHDDDLDYSDIYII
CHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCCEEEC
>Mature Secondary Structure 
GKYDLALEAYNKAIEVDPSHPYAYNNKAEILRKLEKYELALEAYNKAIEIDPNYSDAYF
CCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHC
NKSKLFDELGNYEVALEAYDRALTYRHDDDLDYSDIYII
CHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA