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The map label for this gene is 15893279

Identifier: 15893279

GI number: 15893279

Start: 1254325

End: 1254840

Strand: Reverse

Name: 15893279

Synonym: RC1356

Alternate gene names: NA

Gene position: 1254840-1254325 (Counterclockwise)

Preceding gene: 15893280

Following gene: 15893276

Centisome position: 98.9

GC content: 27.52

Gene sequence:

>516_bases
ATGATCAGAAAATTTTTACTCACAATTTTTGCTCTTTGGGTCGGTGGTTTTGGTTATTATTTATATTTAATAAATTCTTA
TAAGCTTAATAGTAATACCACTAATGCAATAATAGTATTTGCAGGAGGAGGACATAAAATTGAAACCGGTATTGCTTGGC
TTAAGGCAGGTTATGCACCTATATTATTTATTACTGGTATAGAATCTACAGAGCAATTAAAAATTTTGTTAAAGGAACGT
AATGTTATAGAACAGCAGGTAATATTTGCTCCGAATAAAATAATGTCTGAAGAGGATAATATTAAGAAAGTGGTTGATTT
TATTGTAACTTACAATCTTACTTCAATAATTTTAGTAGAGCATAATTATAATATGCCTTTTATGCTAAATAAGCTTGAAA
AAGCGATTCCTTCTTCTAATAATATCTATATAGTACCATATCCTGTTTTTTCCAAACAAAAATATGATGTGTTATTAAAA
TCCTATCATCGTTATTTAATGAGTATACTCGTTTAA

Upstream 100 bases:

>100_bases
TTGAAAATTCTTTAGTAACATCTTTAAATCAGTTAGGGATTCATGTTGAAATGTCTGAATTTGATAAAATTATTCAAACT
GAATTTAATAAAATATTTAA

Downstream 100 bases:

>100_bases
TTTGCTTCTTTACTCTTTTCCAGTACAATATTTTAGAACGGCTACGCCAAATAATGCAGAAATTAAAGAGCCTATTATTA
CTGCAGCTCTTATAGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MIRKFLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFITGIESTEQLKILLKER
NVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEHNYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYDVLLK
SYHRYLMSILV

Sequences:

>Translated_171_residues
MIRKFLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFITGIESTEQLKILLKER
NVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEHNYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYDVLLK
SYHRYLMSILV
>Mature_171_residues
MIRKFLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAPILFITGIESTEQLKILLKER
NVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVEHNYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYDVLLK
SYHRYLMSILV

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1356_RICCN (Q92FX1)

Other databases:

- EMBL:   AE006914
- PIR:   D97869
- RefSeq:   NP_360993.1
- GeneID:   928506
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC1356
- NMPDR:   fig|272944.1.peg.1356
- OMA:   IEQQVIL
- ProtClustDB:   CLSK871123
- BioCyc:   RCON272944:RC1356-MONOMER
- InterPro:   IPR003848

Pfam domain/function: PF02698 DUF218

EC number: NA

Molecular weight: Translated: 19681; Mature: 19681

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe06a894)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKFLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAP
CHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCEEEEEECCCCEEHHHHHHHHCCCCE
ILFITGIESTEQLKILLKERNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVE
EEEEECCCCHHHHHHHHHHHHHHHHHHEECCHHHCCCCCHHHHHHHHHHHCCCEEEEEEE
HNYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYDVLLKSYHRYLMSILV
ECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MIRKFLLTIFALWVGGFGYYLYLINSYKLNSNTTNAIIVFAGGGHKIETGIAWLKAGYAP
CHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCEEEEEECCCCEEHHHHHHHHCCCCE
ILFITGIESTEQLKILLKERNVIEQQVIFAPNKIMSEEDNIKKVVDFIVTYNLTSIILVE
EEEEECCCCHHHHHHHHHHHHHHHHHHEECCHHHCCCCCHHHHHHHHHHHCCCEEEEEEE
HNYNMPFMLNKLEKAIPSSNNIYIVPYPVFSKQKYDVLLKSYHRYLMSILV
ECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893