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The map label for this gene is 15893262

Identifier: 15893262

GI number: 15893262

Start: 1242473

End: 1243168

Strand: Reverse

Name: 15893262

Synonym: RC1339

Alternate gene names: NA

Gene position: 1243168-1242473 (Counterclockwise)

Preceding gene: 15893263

Following gene: 15893261

Centisome position: 97.98

GC content: 30.6

Gene sequence:

>696_bases
ATGAATAAAAAACTCATAAAACTTATTTTTATCATTTGTAGCACCGTAATTGTAACCGGTTTATTATACAAATATATCAA
TCAACATTATCCAAAATTTTTTAAAGCACCACAAAATATAGGGAGTTTTTGTGCGTCATTATTAATATTATTTAGTATAA
TTTACAGTACTATTAGCCAAAATGAAATACGCAGATTTTGTTTGCAATTAGCAATGTGGGCAGTAATTTTCTTAGTTATA
ATAACCGGTTATGCTTTTAGGTTTGAGCTGAACTACGCTTATCATAGAGTAATGTCTGCTTTAATTCCATCATATAAATG
GTCTACTGAAGTCGGAGAAATTATTATAGCCCGTAACAGAGACGGGCATTTTTATATCAATGCTTTTGTAAATAACGTTA
AAATAAAATTTATGGTAGATACAGGGGCAAGTGATATAGCTTTAACTAAAGAAGATGCTCAAAAATTAGGCTTTGACTTA
ACTAAATTAAAATATACTAGAACTTATCTAACAGCTAACGGCGAAAATAAAGCCGCCCCTATAACCTTAAATAGTGTAGT
AATCGGTAAGGAATTTAAGAACATCAAAGGACATGTAGGTCTTGGTGACCTTGATATTTCACTTCTTGGTATGTCGCTAC
TTGAGCGTTTCAAAGGTTTCAGGATTGATAAGGATTTATTGATCTTGAATTATTAA

Upstream 100 bases:

>100_bases
TAAAAATGGGCTGGGACTTTGGTTTGATTATATAGATTAAAATTTATATACTCAGATAGAACTTCGTATACCTATTCTTT
ATTTACTTGTAGTATATTAT

Downstream 100 bases:

>100_bases
ACTTCTTGTATAACTTGCTTCTAAAGGCAATTTGTACGTCAATCCTAATCCCTAATTTTCACGTATGTCTATATATGCTG
CAGCGGCAAGTGCTTCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MNKKLIKLIFIICSTVIVTGLLYKYINQHYPKFFKAPQNIGSFCASLLILFSIIYSTISQNEIRRFCLQLAMWAVIFLVI
ITGYAFRFELNYAYHRVMSALIPSYKWSTEVGEIIIARNRDGHFYINAFVNNVKIKFMVDTGASDIALTKEDAQKLGFDL
TKLKYTRTYLTANGENKAAPITLNSVVIGKEFKNIKGHVGLGDLDISLLGMSLLERFKGFRIDKDLLILNY

Sequences:

>Translated_231_residues
MNKKLIKLIFIICSTVIVTGLLYKYINQHYPKFFKAPQNIGSFCASLLILFSIIYSTISQNEIRRFCLQLAMWAVIFLVI
ITGYAFRFELNYAYHRVMSALIPSYKWSTEVGEIIIARNRDGHFYINAFVNNVKIKFMVDTGASDIALTKEDAQKLGFDL
TKLKYTRTYLTANGENKAAPITLNSVVIGKEFKNIKGHVGLGDLDISLLGMSLLERFKGFRIDKDLLILNY
>Mature_231_residues
MNKKLIKLIFIICSTVIVTGLLYKYINQHYPKFFKAPQNIGSFCASLLILFSIIYSTISQNEIRRFCLQLAMWAVIFLVI
ITGYAFRFELNYAYHRVMSALIPSYKWSTEVGEIIIARNRDGHFYINAFVNNVKIKFMVDTGASDIALTKEDAQKLGFDL
TKLKYTRTYLTANGENKAAPITLNSVVIGKEFKNIKGHVGLGDLDISLLGMSLLERFKGFRIDKDLLILNY

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018061
- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: PF00077 RVP [H]

EC number: NA

Molecular weight: Translated: 26378; Mature: 26378

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLIKLIFIICSTVIVTGLLYKYINQHYPKFFKAPQNIGSFCASLLILFSIIYSTISQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCH
NEIRRFCLQLAMWAVIFLVIITGYAFRFELNYAYHRVMSALIPSYKWSTEVGEIIIARNR
HHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
DGHFYINAFVNNVKIKFMVDTGASDIALTKEDAQKLGFDLTKLKYTRTYLTANGENKAAP
CCCEEEEEEEECEEEEEEEECCCCCEEECHHHHHHHCCHHHHEEEEEEEEEECCCCCCCC
ITLNSVVIGKEFKNIKGHVGLGDLDISLLGMSLLERFKGFRIDKDLLILNY
EEEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure
MNKKLIKLIFIICSTVIVTGLLYKYINQHYPKFFKAPQNIGSFCASLLILFSIIYSTISQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCH
NEIRRFCLQLAMWAVIFLVIITGYAFRFELNYAYHRVMSALIPSYKWSTEVGEIIIARNR
HHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
DGHFYINAFVNNVKIKFMVDTGASDIALTKEDAQKLGFDLTKLKYTRTYLTANGENKAAP
CCCEEEEEEEECEEEEEEEECCCCCEEECHHHHHHHCCHHHHEEEEEEEEEECCCCCCCC
ITLNSVVIGKEFKNIKGHVGLGDLDISLLGMSLLERFKGFRIDKDLLILNY
EEEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]