Click here to switch to the map view.

The map label for this gene is p34 [H]

Identifier: 15893209

GI number: 15893209

Start: 1192283

End: 1193203

Strand: Reverse

Name: p34 [H]

Synonym: RC1286

Alternate gene names: 15893209

Gene position: 1193203-1192283 (Counterclockwise)

Preceding gene: 15893213

Following gene: 15893208

Centisome position: 94.05

GC content: 31.27

Gene sequence:

>921_bases
TTGGAAAGATTTGTCATGGATACTAATAGCCGTAATCAGTTAATAAAATCGGCATCTTATTTATCGGTTACTACGGCATT
AATTATTTTAAGTATAAAATTATATGCTTGGGTTGTTACCGATTCGCAATCAATCCTTGCTTCTTTAATTGATTCAATGC
TTGATATAACTTCCTCCTTTATTAATCTAATAGCTTTAAGATTTGCCCTGCAACCGCCGGATCATCATCATCGATTCGGG
TATGAAAAACTGCAGGATTTAACAATTTTTTCTCAATCGATATTTTTCTTTGCTTCAGCTTTTTTTGTAGGCTTTTCTTC
GGTTAAATCTTTATTTGAAAAAACAAAACCGGAGAATATGAGCGACGGTACTACTGTAATGTATGTATGTATATTCTTAA
CAATTATTTTAGTGTTTTACCAAACTTATGTAATTAAAAAAACAGGATCGGAAATAGTAAAAGCCGATAAGCTTCATTAT
TTCACGGACTTACTAACTAATGTTATAGTAATTATCTCTATAAATTTAAGTGATTATTTTTGGTTTGTTGACCCATTATT
TGGTGTAGTTATTTCGTTATATATATTTCACTCTTCTTATTCTTTATTTAAAAAGGCATTTAAAAATTTAGTAGATCATG
AATTACCCGAACAAGACAGACAAAAAATTATCTCGATAGTTAATAACCATTTAGGGGCAAAAGGTATGCACGAAATGAAA
ACTAGATATGCCGGTCAAAAAGCTTTTATCCAGTGCCATCTGGAAATGGACGGTAATATGTCGCTTTATAATGCTCATAA
AATTAGCGATGAGATTGCTTTTGAAATATTGCAGGAATTTCCGGAGGCTGAAATAATTATCCACCAAGATCCTTTTGGAA
TCGAAGAACACGTAAAGTACCGTGAATATATTGTTAGATAA

Upstream 100 bases:

>100_bases
TTAAATTATTTGTATTTTAAAATATTATTTTTAATTTTGTTCACAGAACCTCATTATAATTGAATTTTATATTTTCTTTG
TTAAACTACAAATAAATAAA

Downstream 100 bases:

>100_bases
AGAAGCTAATTTTAATAATTTTTTCATGGAGCAAGCTTTAAAACAAGCAAAGATTGCTTTTGATAAAAATGAAGTCCCGG
TCGGAGCGGTAGTTGTAGAT

Product: protein p34

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MERFVMDTNSRNQLIKSASYLSVTTALIILSIKLYAWVVTDSQSILASLIDSMLDITSSFINLIALRFALQPPDHHHRFG
YEKLQDLTIFSQSIFFFASAFFVGFSSVKSLFEKTKPENMSDGTTVMYVCIFLTIILVFYQTYVIKKTGSEIVKADKLHY
FTDLLTNVIVIISINLSDYFWFVDPLFGVVISLYIFHSSYSLFKKAFKNLVDHELPEQDRQKIISIVNNHLGAKGMHEMK
TRYAGQKAFIQCHLEMDGNMSLYNAHKISDEIAFEILQEFPEAEIIIHQDPFGIEEHVKYREYIVR

Sequences:

>Translated_306_residues
MERFVMDTNSRNQLIKSASYLSVTTALIILSIKLYAWVVTDSQSILASLIDSMLDITSSFINLIALRFALQPPDHHHRFG
YEKLQDLTIFSQSIFFFASAFFVGFSSVKSLFEKTKPENMSDGTTVMYVCIFLTIILVFYQTYVIKKTGSEIVKADKLHY
FTDLLTNVIVIISINLSDYFWFVDPLFGVVISLYIFHSSYSLFKKAFKNLVDHELPEQDRQKIISIVNNHLGAKGMHEMK
TRYAGQKAFIQCHLEMDGNMSLYNAHKISDEIAFEILQEFPEAEIIIHQDPFGIEEHVKYREYIVR
>Mature_306_residues
MERFVMDTNSRNQLIKSASYLSVTTALIILSIKLYAWVVTDSQSILASLIDSMLDITSSFINLIALRFALQPPDHHHRFG
YEKLQDLTIFSQSIFFFASAFFVGFSSVKSLFEKTKPENMSDGTTVMYVCIFLTIILVFYQTYVIKKTGSEIVKADKLHY
FTDLLTNVIVIISINLSDYFWFVDPLFGVVISLYIFHSSYSLFKKAFKNLVDHELPEQDRQKIISIVNNHLGAKGMHEMK
TRYAGQKAFIQCHLEMDGNMSLYNAHKISDEIAFEILQEFPEAEIIIHQDPFGIEEHVKYREYIVR

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=268, Percent_Identity=39.5522388059701, Blast_Score=228, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI115533506, Length=286, Percent_Identity=23.7762237762238, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115533508, Length=286, Percent_Identity=23.7762237762238, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325032, Length=221, Percent_Identity=24.8868778280543, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 35355; Mature: 35355

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFVMDTNSRNQLIKSASYLSVTTALIILSIKLYAWVVTDSQSILASLIDSMLDITSSF
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHH
INLIALRFALQPPDHHHRFGYEKLQDLTIFSQSIFFFASAFFVGFSSVKSLFEKTKPENM
HHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SDGTTVMYVCIFLTIILVFYQTYVIKKTGSEIVKADKLHYFTDLLTNVIVIISINLSDYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHH
WFVDPLFGVVISLYIFHSSYSLFKKAFKNLVDHELPEQDRQKIISIVNNHLGAKGMHEMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
TRYAGQKAFIQCHLEMDGNMSLYNAHKISDEIAFEILQEFPEAEIIIHQDPFGIEEHVKY
HHHCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
REYIVR
HHHHCC
>Mature Secondary Structure
MERFVMDTNSRNQLIKSASYLSVTTALIILSIKLYAWVVTDSQSILASLIDSMLDITSSF
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHH
INLIALRFALQPPDHHHRFGYEKLQDLTIFSQSIFFFASAFFVGFSSVKSLFEKTKPENM
HHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SDGTTVMYVCIFLTIILVFYQTYVIKKTGSEIVKADKLHYFTDLLTNVIVIISINLSDYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHH
WFVDPLFGVVISLYIFHSSYSLFKKAFKNLVDHELPEQDRQKIISIVNNHLGAKGMHEMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHH
TRYAGQKAFIQCHLEMDGNMSLYNAHKISDEIAFEILQEFPEAEIIIHQDPFGIEEHVKY
HHHCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
REYIVR
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2124682 [H]