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The map label for this gene is ccmC [H]

Identifier: 15893207

GI number: 15893207

Start: 1191089

End: 1191781

Strand: Reverse

Name: ccmC [H]

Synonym: RC1284

Alternate gene names: 15893207

Gene position: 1191781-1191089 (Counterclockwise)

Preceding gene: 15893208

Following gene: 15893206

Centisome position: 93.93

GC content: 32.76

Gene sequence:

>693_bases
ATGCTAAAACTATTAACCCCCTATTATTTTAATAAATTATCAAAGGTTATAATACCTATATTAGCTATATCTACTTGCGT
AATGATGATTATAGGTCTTTATTTAGCCCTCATAGTTTCGCCGGTAGATTATCAGCAAGGTGATTTTGTACGCATTATGT
ATGTTCATGTCCCTGCCTCTTGGATGGCTCTTGGTGTTTATGTTTTCATGGCAGTATGCAGCTTTAGCTATTTAGTATGG
AAAACTACTATTAGCTATTTGCTAGCCGTAGCTTCTAGTTATGTTGGGGCTACTTTTACTTTGATTAGTTTAGTAACAGG
TTCTTTATGGGGAAAACCTATATGGGGGACATGGTGGGTTTGGGATGCAAGACTTACCTCCATGCTCATATTATTTTTAT
TATATTTAAGCTATATTATTATAGTGAATAGTGCGGATAATATAAGAAAGGCACAAAATCCTTCTTCTATTATTGCTCTT
ATCGGACTGATTAACATACCGATAGTAAAATTCTCGGTAAATATTTGGTATAGTCTGCATCAGCCTGCTAGTGTTTTAAG
GCTAGGGAGTCCAACTATTCACTCTTCAATGCTAAAGCCTTTAATTATCATGTTTATTAGTTTTATATTATATTTTCTAT
TAGTATTACTTTTAAGAACTGCTATATTAATCGACAAAATCAAAAACAGATAA

Upstream 100 bases:

>100_bases
GAATTCTTGCCGAAGATTCGGGGCTATTAATGAAAGAGTTTTTTAAGAGGATAAGAACTGTTATTTCTAGCCACAGAATG
ACATAAAGAAGTAAGAAAAC

Downstream 100 bases:

>100_bases
TAAAATGACTTATGTTGTAACCGATGAATGCGTAAAATGTAAATATACCGATTGTGTTGAAGTATGTCCTGTAGATTGTT
TTTATGAAGGTGAAAGGGAA

Product: heme exporter protein C

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycZ [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MLKLLTPYYFNKLSKVIIPILAISTCVMMIIGLYLALIVSPVDYQQGDFVRIMYVHVPASWMALGVYVFMAVCSFSYLVW
KTTISYLLAVASSYVGATFTLISLVTGSLWGKPIWGTWWVWDARLTSMLILFLLYLSYIIIVNSADNIRKAQNPSSIIAL
IGLINIPIVKFSVNIWYSLHQPASVLRLGSPTIHSSMLKPLIIMFISFILYFLLVLLLRTAILIDKIKNR

Sequences:

>Translated_230_residues
MLKLLTPYYFNKLSKVIIPILAISTCVMMIIGLYLALIVSPVDYQQGDFVRIMYVHVPASWMALGVYVFMAVCSFSYLVW
KTTISYLLAVASSYVGATFTLISLVTGSLWGKPIWGTWWVWDARLTSMLILFLLYLSYIIIVNSADNIRKAQNPSSIIAL
IGLINIPIVKFSVNIWYSLHQPASVLRLGSPTIHSSMLKPLIIMFISFILYFLLVLLLRTAILIDKIKNR
>Mature_230_residues
MLKLLTPYYFNKLSKVIIPILAISTCVMMIIGLYLALIVSPVDYQQGDFVRIMYVHVPASWMALGVYVFMAVCSFSYLVW
KTTISYLLAVASSYVGATFTLISLVTGSLWGKPIWGTWWVWDARLTSMLILFLLYLSYIIIVNSADNIRKAQNPSSIIAL
IGLINIPIVKFSVNIWYSLHQPASVLRLGSPTIHSSMLKPLIIMFISFILYFLLVLLLRTAILIDKIKNR

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=228, Percent_Identity=40.3508771929825, Blast_Score=173, Evalue=8e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 26051; Mature: 26051

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLLTPYYFNKLSKVIIPILAISTCVMMIIGLYLALIVSPVDYQQGDFVRIMYVHVPAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHH
WMALGVYVFMAVCSFSYLVWKTTISYLLAVASSYVGATFTLISLVTGSLWGKPIWGTWWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WDARLTSMLILFLLYLSYIIIVNSADNIRKAQNPSSIIALIGLINIPIVKFSVNIWYSLH
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEECC
QPASVLRLGSPTIHSSMLKPLIIMFISFILYFLLVLLLRTAILIDKIKNR
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKLLTPYYFNKLSKVIIPILAISTCVMMIIGLYLALIVSPVDYQQGDFVRIMYVHVPAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHH
WMALGVYVFMAVCSFSYLVWKTTISYLLAVASSYVGATFTLISLVTGSLWGKPIWGTWWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WDARLTSMLILFLLYLSYIIIVNSADNIRKAQNPSSIIALIGLINIPIVKFSVNIWYSLH
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEECC
QPASVLRLGSPTIHSSMLKPLIIMFISFILYFLLVLLLRTAILIDKIKNR
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1850420; 12597275 [H]