| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15893182
Identifier: 15893182
GI number: 15893182
Start: 1162568
End: 1163032
Strand: Reverse
Name: 15893182
Synonym: RC1259
Alternate gene names: NA
Gene position: 1163032-1162568 (Counterclockwise)
Preceding gene: 15893183
Following gene: 15893181
Centisome position: 91.67
GC content: 35.48
Gene sequence:
>465_bases ATGGTGATTTTTGATGAATTTACTGCTATTACTTATTCCGGTAGTATAGGTACTAAAGGAATGGTCGATATAGTTCAAAT AGACAGGGGTGATGTTACAATTCAAGGTACCGTGAAAACAGGCTCGATTTCATTTACTACTGCTCAGTCTGCAACTTTAA GTCTTAATAATACAAGTATAATAAATGAATCAATTACGACCACAGGTAATAAAATCCATACTCTTGCAATATCAAATGAT TTAACAACTGGAGCTAGCGGTAGTGGTTCGGTAGGTTCAGACTCAAATCACCTTAAAACCGTTCAGTTCAACGGTGTAGA CAGTAAAATCACAATCGATAGCGAAGATTTTTACTCGAGTATAACAACCAAGACTAATAATCAAGGTACGGCAATATTTA ACGCTAATAATGGTTTGACCGATGATTTAGGCGGTGAGAATTTAAACCTTAAACTAGTTCAGTAG
Upstream 100 bases:
>100_bases AAATGGTGGCGACATAAAATTTAAGGGAACAACGAATAGTTTAGATATTTCTAAAGGATCAAGCTTTTCTCCTTTTGCTT TTAAAGCCTGAGGATAGAGC
Downstream 100 bases:
>100_bases TAATAAAGACACGGTAAAAGGGGATACCTATGCTAAAACTATTGATGCCGGTAAATCAGCGGTATTTACCGGTTATAACA GTAGAAGTTTAGACATTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVIFDEFTAITYSGSIGTKGMVDIVQIDRGDVTIQGTVKTGSISFTTAQSATLSLNNTSIINESITTTGNKIHTLAISND LTTGASGSGSVGSDSNHLKTVQFNGVDSKITIDSEDFYSSITTKTNNQGTAIFNANNGLTDDLGGENLNLKLVQ
Sequences:
>Translated_154_residues MVIFDEFTAITYSGSIGTKGMVDIVQIDRGDVTIQGTVKTGSISFTTAQSATLSLNNTSIINESITTTGNKIHTLAISND LTTGASGSGSVGSDSNHLKTVQFNGVDSKITIDSEDFYSSITTKTNNQGTAIFNANNGLTDDLGGENLNLKLVQ >Mature_154_residues MVIFDEFTAITYSGSIGTKGMVDIVQIDRGDVTIQGTVKTGSISFTTAQSATLSLNNTSIINESITTTGNKIHTLAISND LTTGASGSGSVGSDSNHLKTVQFNGVDSKITIDSEDFYSSITTKTNNQGTAIFNANNGLTDDLGGENLNLKLVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16104; Mature: 16104
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIFDEFTAITYSGSIGTKGMVDIVQIDRGDVTIQGTVKTGSISFTTAQSATLSLNNTSI CEEECCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEECEEEEEECCCEEEEECCCEE INESITTTGNKIHTLAISNDLTTGASGSGSVGSDSNHLKTVQFNGVDSKITIDSEDFYSS ECCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHHE ITTKTNNQGTAIFNANNGLTDDLGGENLNLKLVQ EEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MVIFDEFTAITYSGSIGTKGMVDIVQIDRGDVTIQGTVKTGSISFTTAQSATLSLNNTSI CEEECCEEEEEEECCCCCCCCEEEEEECCCCEEEEEEEEECEEEEEECCCEEEEECCCEE INESITTTGNKIHTLAISNDLTTGASGSGSVGSDSNHLKTVQFNGVDSKITIDSEDFYSS ECCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCHHHHHE ITTKTNNQGTAIFNANNGLTDDLGGENLNLKLVQ EEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA