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The map label for this gene is ypfH [C]

Identifier: 15893070

GI number: 15893070

Start: 1058200

End: 1058850

Strand: Reverse

Name: ypfH [C]

Synonym: RC1147

Alternate gene names: 15893070

Gene position: 1058850-1058200 (Counterclockwise)

Preceding gene: 15893071

Following gene: 15893069

Centisome position: 83.46

GC content: 37.79

Gene sequence:

>651_bases
ATGAGCAAATATTTAGAATACCCCGAAGTAGAAAGTAAAGAGCAGCCGCCGAAGAAGCTAGTAGTATTACTGCACGGTGT
CGGCTCGGACGGACATGATTTAATAGGACTTGTGCCTTATATCAAAAATTATTTACCCAATTGTCATTTTATTTCCCCGC
ATGGTATCGAGGCTTATGATATGATGCCTTATGGTAGACAATGGTTTAGTTTGCAAGACCGCAGCCCGCATATTATGGCA
AAGCTAATTGCAAATAATATTTCTAAGGTTGAAGATATAATAAAGCAAAAGCAGGACGAGTTAAATCTAACCAACAAAGA
TACTATCATTATTGGCTTTTCTCAAGGTACGATGATAGGATTATATTTAACACTAGTTCAAAAAGAGCCGTTTTGCTGTA
CTATAGGTTTTTCGGGTGCATTAATTCCACCTATGGAAGTGAATAATAAGCTTACTCCTATATGCTTGATTCATGGGGAA
TTAGATGAGGTGGTCGGTGTTAGTGAGATGTATAATGCTTCAAACTATTTATCTAAGCTGCATATAGAGCATAGCGGACA
TAAATTAACGTCTCTTGCTCATTCAATAGATGGACGGGGGCTTGAGATTGCGATTAATTTTATAAATAACCGTCATTGCG
AGCAGCAGTAG

Upstream 100 bases:

>100_bases
ATACGCTCCGCTCCTCGCCTTGCAGACTCCTTGCTCTTTTTGAAATTGACCTTCACTACTACTCAACCTTAATATTTTAA
GTACATAAACATATAAAAAC

Downstream 100 bases:

>100_bases
GCTGCGTGGCAATCTCAGGATTGTGGTATGAGATTGCTTCGTCAAAATTTTCAATTTTTCCTCGCAATGATGATTAGATA
TCCACACAACAAAACCAAAA

Product: putative serine esterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSKYLEYPEVESKEQPPKKLVVLLHGVGSDGHDLIGLVPYIKNYLPNCHFISPHGIEAYDMMPYGRQWFSLQDRSPHIMA
KLIANNISKVEDIIKQKQDELNLTNKDTIIIGFSQGTMIGLYLTLVQKEPFCCTIGFSGALIPPMEVNNKLTPICLIHGE
LDEVVGVSEMYNASNYLSKLHIEHSGHKLTSLAHSIDGRGLEIAINFINNRHCEQQ

Sequences:

>Translated_216_residues
MSKYLEYPEVESKEQPPKKLVVLLHGVGSDGHDLIGLVPYIKNYLPNCHFISPHGIEAYDMMPYGRQWFSLQDRSPHIMA
KLIANNISKVEDIIKQKQDELNLTNKDTIIIGFSQGTMIGLYLTLVQKEPFCCTIGFSGALIPPMEVNNKLTPICLIHGE
LDEVVGVSEMYNASNYLSKLHIEHSGHKLTSLAHSIDGRGLEIAINFINNRHCEQQ
>Mature_215_residues
SKYLEYPEVESKEQPPKKLVVLLHGVGSDGHDLIGLVPYIKNYLPNCHFISPHGIEAYDMMPYGRQWFSLQDRSPHIMAK
LIANNISKVEDIIKQKQDELNLTNKDTIIIGFSQGTMIGLYLTLVQKEPFCCTIGFSGALIPPMEVNNKLTPICLIHGEL
DEVVGVSEMYNASNYLSKLHIEHSGHKLTSLAHSIDGRGLEIAINFINNRHCEQQ

Specific function: Unknown

COG id: COG0400

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase 2 family

Homologues:

Organism=Escherichia coli, GI87082111, Length=199, Percent_Identity=26.1306532663317, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1147_RICCN (Q92GH6)

Other databases:

- EMBL:   AE006914
- PIR:   C97843
- RefSeq:   NP_360784.1
- ProteinModelPortal:   Q92GH6
- GeneID:   928294
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC1147
- NMPDR:   fig|272944.1.peg.1147
- OMA:   FSQGSIM
- ProtClustDB:   CLSK871056
- BioCyc:   RCON272944:RC1147-MONOMER
- InterPro:   IPR003140

Pfam domain/function: PF02230 Abhydrolase_2

EC number: 3.1.-.- [C]

Molecular weight: Translated: 24299; Mature: 24168

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: ACT_SITE 114-114 ACT_SITE 162-162 ACT_SITE 194-194

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYLEYPEVESKEQPPKKLVVLLHGVGSDGHDLIGLVPYIKNYLPNCHFISPHGIEAYD
CCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEE
MMPYGRQWFSLQDRSPHIMAKLIANNISKVEDIIKQKQDELNLTNKDTIIIGFSQGTMIG
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
LYLTLVQKEPFCCTIGFSGALIPPMEVNNKLTPICLIHGELDEVVGVSEMYNASNYLSKL
EEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHCHHHHHHHHHHHHHE
HIEHSGHKLTSLAHSIDGRGLEIAINFINNRHCEQQ
EECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SKYLEYPEVESKEQPPKKLVVLLHGVGSDGHDLIGLVPYIKNYLPNCHFISPHGIEAYD
CCCCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEE
MMPYGRQWFSLQDRSPHIMAKLIANNISKVEDIIKQKQDELNLTNKDTIIIGFSQGTMIG
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEE
LYLTLVQKEPFCCTIGFSGALIPPMEVNNKLTPICLIHGELDEVVGVSEMYNASNYLSKL
EEEEEECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHCHHHHHHHHHHHHHE
HIEHSGHKLTSLAHSIDGRGLEIAINFINNRHCEQQ
EECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893