| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15893052
Identifier: 15893052
GI number: 15893052
Start: 1046323
End: 1046793
Strand: Reverse
Name: 15893052
Synonym: RC1129
Alternate gene names: NA
Gene position: 1046793-1046323 (Counterclockwise)
Preceding gene: 15893053
Following gene: 15893051
Centisome position: 82.51
GC content: 34.61
Gene sequence:
>471_bases ATGATTAACCTTATGATTGATCTTGTAGTGCAGAAGTTAGAAATTGACAAAAAATATTTATTTAGCCGCTCTGAAATATG CTTAAGAAGAGTTACCTCGCATAAAAAGAAAAAAGATAAACCGGTAATTTATAATTTTGCCGCTCCTTCCTTAGAAATGT TTAATAGTTTTTTTCTAAGACCATTAGATTTTGTACGAAGTAATATAGAAAAATTTGACTTGGAATCAGCAATTGCCAAA TATCTCGGTAAAGAAGATAAGCCGGATTCCATAGATGTTTTAAAGCATCAAGAAAGTCTACAAGAACTGTTATCTCCATT TATGATGCAACCGATGCGTTGGTGTTCATCGCCGAGTCATTCTCTTGCGGTACTGCAAGCTGTTGCGATTAATTTGGTAT TACCCTCTTTTCAGGAAAGCTTTTTGCTGTTAATGGTCCACCTGGTACAGGAAAACCACTATACTTTTTGA
Upstream 100 bases:
>100_bases TAATAATAACAGCCTAATAGAGGAAGTATTTTCAGAAAGTGAGAGAATATATGTTAAGGATAAAAAGCAAGATTCTTGAG TTAAAACTCTAGATTTAAAA
Downstream 100 bases:
>100_bases TCTTATAGCAAATATCTATGTAGATCGTGCTTCTTATTTAGTAACTTTAAAGATCCTAAGGAGGGGTTTCAAAATAAAAA ATCTTCCTTACATACACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MINLMIDLVVQKLEIDKKYLFSRSEICLRRVTSHKKKKDKPVIYNFAAPSLEMFNSFFLRPLDFVRSNIEKFDLESAIAK YLGKEDKPDSIDVLKHQESLQELLSPFMMQPMRWCSSPSHSLAVLQAVAINLVLPSFQESFLLLMVHLVQENHYTF
Sequences:
>Translated_156_residues MINLMIDLVVQKLEIDKKYLFSRSEICLRRVTSHKKKKDKPVIYNFAAPSLEMFNSFFLRPLDFVRSNIEKFDLESAIAK YLGKEDKPDSIDVLKHQESLQELLSPFMMQPMRWCSSPSHSLAVLQAVAINLVLPSFQESFLLLMVHLVQENHYTF >Mature_156_residues MINLMIDLVVQKLEIDKKYLFSRSEICLRRVTSHKKKKDKPVIYNFAAPSLEMFNSFFLRPLDFVRSNIEKFDLESAIAK YLGKEDKPDSIDVLKHQESLQELLSPFMMQPMRWCSSPSHSLAVLQAVAINLVLPSFQESFLLLMVHLVQENHYTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18209; Mature: 18209
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLMIDLVVQKLEIDKKYLFSRSEICLRRVTSHKKKKDKPVIYNFAAPSLEMFNSFFLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH PLDFVRSNIEKFDLESAIAKYLGKEDKPDSIDVLKHQESLQELLSPFMMQPMRWCSSPSH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH SLAVLQAVAINLVLPSFQESFLLLMVHLVQENHYTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MINLMIDLVVQKLEIDKKYLFSRSEICLRRVTSHKKKKDKPVIYNFAAPSLEMFNSFFLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH PLDFVRSNIEKFDLESAIAKYLGKEDKPDSIDVLKHQESLQELLSPFMMQPMRWCSSPSH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH SLAVLQAVAINLVLPSFQESFLLLMVHLVQENHYTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA