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The map label for this gene is rpmC

Identifier: 15892921

GI number: 15892921

Start: 929437

End: 929652

Strand: Reverse

Name: rpmC

Synonym: RC0998

Alternate gene names: 15892921

Gene position: 929652-929437 (Counterclockwise)

Preceding gene: 15892922

Following gene: 15892920

Centisome position: 73.27

GC content: 23.15

Gene sequence:

>216_bases
ATGAATGATTTAAAATTATTAAGAAGTAAGTTATCTACTGAAACAATAGAAGAGCTTTATAAAAACCTTAATCTTTTAAA
AAAAGAATTGTTTAATTTAAGATTTCAACAAGCTTTAGGTGATTTAAAAAATACTAGTAGGTTTTCGTTAGTCAAAAAGT
CTATAGCACGTATTAAAACTGAATTAACAAAAAGAGCTAATAGTGAGGAATATTAA

Upstream 100 bases:

>100_bases
ATTATGTTTGAAATTGAAGGGGTAGAAGAAAATGTTGCACTTAGAGCTTTGGAGCTTGCAAGTGCAAAATTACCTGTTAG
AACAAGGATAGTGAGACGTT

Downstream 100 bases:

>100_bases
AATGCCGAAAAGAGTGTTACAAGGCGTGGTTATAAGTTCAAAAGCTGATAAGACGGTTACAGTAAAAGTAGAAAGAAAGT
TTAAGCATCCTATTTATAAA

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MNDLKLLRSKLSTETIEELYKNLNLLKKELFNLRFQQALGDLKNTSRFSLVKKSIARIKTELTKRANSEEY

Sequences:

>Translated_71_residues
MNDLKLLRSKLSTETIEELYKNLNLLKKELFNLRFQQALGDLKNTSRFSLVKKSIARIKTELTKRANSEEY
>Mature_71_residues
MNDLKLLRSKLSTETIEELYKNLNLLKKELFNLRFQQALGDLKNTSRFSLVKKSIARIKTELTKRANSEEY

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_RICAE (C3PP99)

Other databases:

- EMBL:   CP001612
- RefSeq:   YP_002845502.1
- ProteinModelPortal:   C3PP99
- SMR:   C3PP99
- GeneID:   7814900
- GenomeReviews:   CP001612_GR
- KEGG:   raf:RAF_ORF0904
- OMA:   NPMRIRQ
- ProtClustDB:   PRK00306
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8376; Mature: 8376

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLKLLRSKLSTETIEELYKNLNLLKKELFNLRFQQALGDLKNTSRFSLVKKSIARIKT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ELTKRANSEEY
HHHHHCCCCCC
>Mature Secondary Structure
MNDLKLLRSKLSTETIEELYKNLNLLKKELFNLRFQQALGDLKNTSRFSLVKKSIARIKT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ELTKRANSEEY
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA