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The map label for this gene is secY [H]

Identifier: 15892909

GI number: 15892909

Start: 923692

End: 924993

Strand: Reverse

Name: secY [H]

Synonym: RC0986

Alternate gene names: 15892909

Gene position: 924993-923692 (Counterclockwise)

Preceding gene: 15892910

Following gene: 15892908

Centisome position: 72.91

GC content: 31.26

Gene sequence:

>1302_bases
ATGGGGCAGAATTTTTCTAAAAAATCCGGTAATGATTTAGTTAGTCGCATTGTTTTTACTATTCTCATTCTTATAGTATG
TAGATTTGGGTCTTTTATACCTATACCTGGTATAGATTCAATTGCTTTAAGTAGTGTGGCTGCACAGAATCAATCCGGAA
TACTCGGAATGTTTAATATGCTATCCGGAGGATCGCTAGGTAGAATGTCCATTTTTGCTTTAGCAATTATGCCTTATATT
ACTGCCTCAATTATTATCCAATTAATGTCAGTTGCATATAAACCTTTGGAAAATTTAAAAAAAGAAGGGGAAGTCGGCAA
AAGAAAAGTAAATCAGCTATCGAGATATTTAACGGTTCTGCTTGCTTCTTTTCAGGCTTATGGAGTTGCTATAAGTTTAG
AGTCGATTGTAACAAATACTGGTCCTGTAGTAATCTTAGCGGGTTTTTTCTTTAGAATTACAACCGTAATTACTTTAGTT
GTAGGCACGATGCTATTAATGTGGTTAGGAGAACAAATTACACAACGCGGAATAGGTAATGGTACGTCTTTAATTATATT
TATAGGTATAATTTCAGGAGTACCTAGTGCTATTATTAGTATGTTTGAATTATCAAGAAAAGGAGCATTATCGCCTTTAA
TAGCGATAGCTGTTTGTATTGGAGTAGTTGTATTAATAGCTATAATTATATTTTTTGAAAGAGCCCAAAGAAAATTATTG
GTGCAGTATCCTAAAAGACAAGTAGGAAATAAAATTTATGGAGGCGAAGCAACCCATATGCCTCTCAAGTTAAATACTTC
TGGTGTAATACCTCCAATATTTGCTAGTTCAATTTTACTATTTCCTGCTACGCTTGCTAATTTTTCTAATAGTAATTCAG
AAACTATGGGCATGCTTACTTATTACTTAGGGCATGGAAAACCTGTATATATTTTATTATATGTAGCATTAATTATGTTT
TTTAGTTTTTTTTATACTGCAATAGTATTTAATTCTGAAGAAACTGCTAATAATTTAAGAAAATACGGTGCTTATATTCC
AGGTAAAAGACCAGGAAAAAATACGTCTGATTATTTTGATTATATACTTACAAGGCTTACAGTTATAGGTGGGATATATT
TAAGTGTAATATGTGTAATTCCGGAGCTATTAATGAATAAATATGTAATCTCTCTTTCTTTAGGAGGTACGAGTTTTTTA
ATTGTAGTGAACGTGGTACTTGATACTATGACTCAGATTCAAACTTACTTATTTAGTAGTAAGTATGAAGGTTTAATGAA
GAAAGTAAAATTAAAAAATTAA

Upstream 100 bases:

>100_bases
TAGTGATGATTTCGCTGCTCCTCTATCATTAAAATTAGATGCTTATTCTTCTAAAGCTAAGGATTTAATCGAGAAAGCAG
GTGGAAAATTATTATAGTAT

Downstream 100 bases:

>100_bases
AAATGAGCTTAAATAGTGATGGTAATTTTTTTAGGTCCTCCAGGAGCGGGAAAGGGCACACAAGGAAAAAAGATAGCTAA
AAAAATTGATTTACCACATA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MGQNFSKKSGNDLVSRIVFTILILIVCRFGSFIPIPGIDSIALSSVAAQNQSGILGMFNMLSGGSLGRMSIFALAIMPYI
TASIIIQLMSVAYKPLENLKKEGEVGKRKVNQLSRYLTVLLASFQAYGVAISLESIVTNTGPVVILAGFFFRITTVITLV
VGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSRKGALSPLIAIAVCIGVVVLIAIIIFFERAQRKLL
VQYPKRQVGNKIYGGEATHMPLKLNTSGVIPPIFASSILLFPATLANFSNSNSETMGMLTYYLGHGKPVYILLYVALIMF
FSFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGIYLSVICVIPELLMNKYVISLSLGGTSFL
IVVNVVLDTMTQIQTYLFSSKYEGLMKKVKLKN

Sequences:

>Translated_433_residues
MGQNFSKKSGNDLVSRIVFTILILIVCRFGSFIPIPGIDSIALSSVAAQNQSGILGMFNMLSGGSLGRMSIFALAIMPYI
TASIIIQLMSVAYKPLENLKKEGEVGKRKVNQLSRYLTVLLASFQAYGVAISLESIVTNTGPVVILAGFFFRITTVITLV
VGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSRKGALSPLIAIAVCIGVVVLIAIIIFFERAQRKLL
VQYPKRQVGNKIYGGEATHMPLKLNTSGVIPPIFASSILLFPATLANFSNSNSETMGMLTYYLGHGKPVYILLYVALIMF
FSFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGIYLSVICVIPELLMNKYVISLSLGGTSFL
IVVNVVLDTMTQIQTYLFSSKYEGLMKKVKLKN
>Mature_432_residues
GQNFSKKSGNDLVSRIVFTILILIVCRFGSFIPIPGIDSIALSSVAAQNQSGILGMFNMLSGGSLGRMSIFALAIMPYIT
ASIIIQLMSVAYKPLENLKKEGEVGKRKVNQLSRYLTVLLASFQAYGVAISLESIVTNTGPVVILAGFFFRITTVITLVV
GTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSRKGALSPLIAIAVCIGVVVLIAIIIFFERAQRKLLV
QYPKRQVGNKIYGGEATHMPLKLNTSGVIPPIFASSILLFPATLANFSNSNSETMGMLTYYLGHGKPVYILLYVALIMFF
SFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGIYLSVICVIPELLMNKYVISLSLGGTSFLI
VVNVVLDTMTQIQTYLFSSKYEGLMKKVKLKN

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=436, Percent_Identity=50, Blast_Score=407, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47336; Mature: 47205

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCC
>Mature Secondary Structure 
GQNFSKKSGNDLVSRIVFTILILIVCRFGSFIPIPGIDSIALSSVAAQNQSGILGMFNM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
LSGGSLGRMSIFALAIMPYITASIIIQLMSVAYKPLENLKKEGEVGKRKVNQLSRYLTVL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LASFQAYGVAISLESIVTNTGPVVILAGFFFRITTVITLVVGTMLLMWLGEQITQRGIGN
HHHHHHHHHEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GTSLIIFIGIISGVPSAIISMFELSRKGALSPLIAIAVCIGVVVLIAIIIFFERAQRKLL
CCHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQYPKRQVGNKIYGGEATHMPLKLNTSGVIPPIFASSILLFPATLANFSNSNSETMGMLT
HHCCHHHHCCEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
YYLGHGKPVYILLYVALIMFFSFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
YILTRLTVIGGIYLSVICVIPELLMNKYVISLSLGGTSFLIVVNVVLDTMTQIQTYLFSS
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
KYEGLMKKVKLKN
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA