| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892825
Identifier: 15892825
GI number: 15892825
Start: 849581
End: 850153
Strand: Reverse
Name: 15892825
Synonym: RC0902
Alternate gene names: NA
Gene position: 850153-849581 (Counterclockwise)
Preceding gene: 15892826
Following gene: 15892824
Centisome position: 67.01
GC content: 29.32
Gene sequence:
>573_bases TTGCAAGTTCATAAGCACATTGCTATAGATACAGGGGGCATGCAAGCAAGTTATTTGTTATCTGAAAATATTAAAGATAG ATACATGGCAAGTAACAAAATTAATCCTACTTACGGTATAGGTTATTTATGGACAAGACTAGAGCAAGCAAGTTATATTT TTAGTACTAAGTTTGATGGCAAAGATAAAAGCGGTGATGATATAAATACATATGTAAAAGCGATTAACTCCATATACGGT AAAAATTATATTACTAAAAATAAAATTTTTGCATATGCTTATTTAGATTTATTTGATCTGTTTTTATTCTATTCAGGATA TTCATTTATTAACTTAAATAATATTCCGATGATTGAATTAGGACCAGTTAAATATTTACCGGCTACTAGAGCGATACTTG CTCCATACGGTTTAGAGCGTGGTTTAGTTAACCATTTTGTTGTTGATAACAAATATATGCAAGTTAATATTAATTACGGC AAAAATCAAAAATTTAAGTCTTACGGTGTCGGAGTTAAAGCTAATAACTTAGTCAAAGTTGAATTTATCGGTTTAGGTAA GGTATGCCTTTAA
Upstream 100 bases:
>100_bases GTTATGGAGCAAGAGCAAAGAAGTTGATTTAAAAGTAACAAAATATGAAGTAGATCCTTTTGAGGGTACAACATATTTTA AAACTAAAGATTTTAATTCT
Downstream 100 bases:
>100_bases AATCCTCAGCTATAGTTAGAGCAGGGTTAAAATTAGATTTATAAGAGAAGGCTTTGTTGCATGATTAATATGTCATTCCT GCGAAAGCAGCAATCCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MQVHKHIAIDTGGMQASYLLSENIKDRYMASNKINPTYGIGYLWTRLEQASYIFSTKFDGKDKSGDDINTYVKAINSIYG KNYITKNKIFAYAYLDLFDLFLFYSGYSFINLNNIPMIELGPVKYLPATRAILAPYGLERGLVNHFVVDNKYMQVNINYG KNQKFKSYGVGVKANNLVKVEFIGLGKVCL
Sequences:
>Translated_190_residues MQVHKHIAIDTGGMQASYLLSENIKDRYMASNKINPTYGIGYLWTRLEQASYIFSTKFDGKDKSGDDINTYVKAINSIYG KNYITKNKIFAYAYLDLFDLFLFYSGYSFINLNNIPMIELGPVKYLPATRAILAPYGLERGLVNHFVVDNKYMQVNINYG KNQKFKSYGVGVKANNLVKVEFIGLGKVCL >Mature_190_residues MQVHKHIAIDTGGMQASYLLSENIKDRYMASNKINPTYGIGYLWTRLEQASYIFSTKFDGKDKSGDDINTYVKAINSIYG KNYITKNKIFAYAYLDLFDLFLFYSGYSFINLNNIPMIELGPVKYLPATRAILAPYGLERGLVNHFVVDNKYMQVNINYG KNQKFKSYGVGVKANNLVKVEFIGLGKVCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21610; Mature: 21610
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVHKHIAIDTGGMQASYLLSENIKDRYMASNKINPTYGIGYLWTRLEQASYIFSTKFDG CCCCCEEEEECCCCEEEEHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEEEECCC KDKSGDDINTYVKAINSIYGKNYITKNKIFAYAYLDLFDLFLFYSGYSFINLNNIPMIEL CCCCCCHHHHHHHHHHHHHCCCCEECCCEEEHHHHHHHHHHHHHCCCCEEEECCCCEEEE GPVKYLPATRAILAPYGLERGLVNHFVVDNKYMQVNINYGKNQKFKSYGVGVKANNLVKV CCEEECCCCHHHHCCCCCHHCCHHHEEECCEEEEEEEECCCCCCCHHHCCCEECCCEEEE EFIGLGKVCL EEECCCCCCC >Mature Secondary Structure MQVHKHIAIDTGGMQASYLLSENIKDRYMASNKINPTYGIGYLWTRLEQASYIFSTKFDG CCCCCEEEEECCCCEEEEHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHCEEEEEEECCC KDKSGDDINTYVKAINSIYGKNYITKNKIFAYAYLDLFDLFLFYSGYSFINLNNIPMIEL CCCCCCHHHHHHHHHHHHHCCCCEECCCEEEHHHHHHHHHHHHHCCCCEEEECCCCEEEE GPVKYLPATRAILAPYGLERGLVNHFVVDNKYMQVNINYGKNQKFKSYGVGVKANNLVKV CCEEECCCCHHHHCCCCCHHCCHHHEEECCEEEEEEEECCCCCCCHHHCCCEECCCEEEE EFIGLGKVCL EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA