| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is secA [H]
Identifier: 15892802
GI number: 15892802
Start: 824154
End: 826874
Strand: Reverse
Name: secA [H]
Synonym: RC0879
Alternate gene names: 15892802
Gene position: 826874-824154 (Counterclockwise)
Preceding gene: 15892804
Following gene: 15892801
Centisome position: 65.17
GC content: 35.5
Gene sequence:
>2721_bases ATGCTTTCTATTTTAAAAAAACTTTTCGGTACTGCAAATGATCGTACTGTAAAAAAACTATTTTCTGAAATTACAAAAAT TAACTCGCTTGAACCTGCTATACAAAAATTATCAGATGAGGAGTTGAAGAATAAAACTGTGGAGTTTAAAGAAAAGCTTA AAAACGGAGCTACTTTAGATGATATAGTATATGAGGCGTTTGCGGTAGTTAGGGAAGCAGCTAAAAGAGTTTGCGGTATG CGTCATTTTGACGTTCAGCTTATAGGTGGCCTGATATTACATCGAGGCATGATTACCGAAATGCGTACCGGTGAGGGTAA GACCTTAGTTGCAACGCTTCCTGCTTACTTAAATGCTTTAACTGGAAAAGGTGTACATGTTGTAACCGTAAATGATTATC TAGCACGCCGTGATTCTGCTTCCATGGGTAAAATTTACAATTTTTTAGGTTTATCGGTTGGATGTATTGTTGGCGGTATG CCTGATGAGGTAAAACGAGCCGCCTATAACGCCGATATTACTCATGCAACAAATAATGAACTCGGTTTCGATTATTTAAG GGATAATATGAAGTATAGCTTGCAGGAGCGGGTACTTCGTCCTTTTAATTTTGCTATCATCGATGAGGTTGATTCGATTT TGATAGATGAAGCAAGAACTCCGCTCGTTATCTCGGGTCCGGTTAATGATAATGCAGAATTATACGGTAAAATTGATAAA ATAGTACGTCTGCTTAATGCAAGTGATTTTGAAAAAGACGAAAAATTAAAAACTATCAATTTAACGGAAACCGGCATTAC ACATATAGAATCGCTTTTAAGTAAAGAAAGTATTATAAAACCAGATACCAGTTTATATGATTTTGAGAATTTAACTTTAG TACATTATGTTAACCAAGCCTTAAGAGCTCATAATATGTTTACTGTTAATGTAGATTATTTGGTGCGTGAAGGTAAAGTA ATGATTATTGATGAGTTTACCGGTCGTGTAATGGAAGGGCGTAGATATTCGGAAGGGTTACATCAAGCATTAGAAGCAAA AGAAAATGTGAAAATTCAAAATGAGAACCAAACTTTAGCATCTATTACTTTCCAAAATTATTTTCGTAATTATCCTAAAT TATCGGGTATGACCGGTACGGCTATGACCGAAGCACCGGAACTAAAAGATATATATAATCTCGATGTGGTCGCAGTCCCA ACCCATAATAAAGTTACAAGGCTTGATCTTGATGACGAAATTTACGGTAGTAAAAAAGAGAAATATGATGCTATCTTAAA GCTAATTAGGGATTGTTACGATCGTGGACAGCCTATACTTGTCGGTACGATAAGCATAGAAAAGTCAGAAGAGCTTTCAA GCGTTTTAAATAAAGAAAAAATCCCTCATAAAGTATTAAACGCCAAATTTCATGAGCAGGAAGCTTTTATTATTGCTCAA GCAGGTAGGTTTAAGGCAGTAACGATTGCAACTAATATGGCAGGGCGGGGTACTGATATTATGCTTGGCGGTAATCCTGA AATGTTAATAGAACAGCTGGATAAAGAACATAATTATGAAGCTAAAATAGCTGAAATAAAAGCTCAAATTGCCGAAGAAA AGAAGCAGGTTATTGAAGCAGGCGGTTTATTTGTGATAGGTACGGAAAGGCATGAAAGCCGTAGGATAGATAATCAACTA AGAGGAAGATCAGGTAGACAAGGTGATCCTGGTAAAACTAAGTTTTTCCTATCGCTTGATGACGATTTAATGCGTATTTT TGCATCAGATCGTATATCAGGAGTCCTTAGAACACTTGGATTGAAAGACGGAGAGGCTATCCACCATCCAATGATTAGTC GTTCACTTGAGAAAGCGCAGCAAAAAGTGGAAGGACATAACTACGAAATGCGTAAAAATTTATTACGTTTTGATGATGTA ATGAATGACCAACGTAAGATAATATACGAGCAACGTACTGAAATTATTAAATCTAAAGATAGTCACGGTTTCTTAAATAG TACTACTGAGGAACTCGCCCAAAAGATAGTATTAACTTTCATGCCGGTAGGCTCTTATAGAGAAGATTGGGATATAGAGA ATTTAAGCGTAGAATTACATCGTGTTTTTTCTATAAAATTTGATCATAATGTAGTAAGTAAAAATGATGTAACGGAAGAA GAAATCACGAAGATCGTTATACAAATGGCTCATGATATATATAAGTCAAAAGAAGAAGCCTATAGTAGCGAGTTAATGCA TAATGCCGTGAAATATATTTTATTAACTACCCTTGATCAAGTTTGGAAAGATCATTTATATAGCTTAGATCATTTAAGAC AAGGCATATCTCTTCGAGCTTATGGCCAAAAAGACCCTCTTAGTGAGTATAAAAGAGAAGCATTTAACTTATTCGAGCAG ATGCTTAATAATTTAAAAGAATTATTTATTCAAACCGTATACCATTTCCATATTGACTTAAAAAATGTTCAAAAAGAAGA TGTTTTGCTTGAGTATAAAAAACTTCAGAAAAATATGCGTGAGAGTCGGGAAGATCCGGCATTTAGTAAATATAACGCAG GAAGTAGCATTGAGACTGACCTTAAACCAGTCGTATCACGCATTGATCCAAAAGATAGAAACCCTGACGATCCTACTAGT TGGGGTAGGGTATCTCGTAATGAGCTATGTCCGTGCGGTTCAGGCAAGAAATATAAATATTGTCATGGTGCAAATGAATA G
Upstream 100 bases:
>100_bases TAAAAAATTATTCATTTAAATAAAATTATAACATTTGATAATTTTATAAAATATACCTATATTTAAGTACTAAAATACTA AAAATATCATAAGGACTTTA
Downstream 100 bases:
>100_bases ATGAAAACCTATAATACCCTACGATTTTTACTCTATGTCATTCCCGCGAAGGCGGGAATCCAGCAAAACTTGAAAAAATC AAAAGGTTATAGCTATTTCT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 906; Mature: 906
Protein sequence:
>906_residues MLSILKKLFGTANDRTVKKLFSEITKINSLEPAIQKLSDEELKNKTVEFKEKLKNGATLDDIVYEAFAVVREAAKRVCGM RHFDVQLIGGLILHRGMITEMRTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLARRDSASMGKIYNFLGLSVGCIVGGM PDEVKRAAYNADITHATNNELGFDYLRDNMKYSLQERVLRPFNFAIIDEVDSILIDEARTPLVISGPVNDNAELYGKIDK IVRLLNASDFEKDEKLKTINLTETGITHIESLLSKESIIKPDTSLYDFENLTLVHYVNQALRAHNMFTVNVDYLVREGKV MIIDEFTGRVMEGRRYSEGLHQALEAKENVKIQNENQTLASITFQNYFRNYPKLSGMTGTAMTEAPELKDIYNLDVVAVP THNKVTRLDLDDEIYGSKKEKYDAILKLIRDCYDRGQPILVGTISIEKSEELSSVLNKEKIPHKVLNAKFHEQEAFIIAQ AGRFKAVTIATNMAGRGTDIMLGGNPEMLIEQLDKEHNYEAKIAEIKAQIAEEKKQVIEAGGLFVIGTERHESRRIDNQL RGRSGRQGDPGKTKFFLSLDDDLMRIFASDRISGVLRTLGLKDGEAIHHPMISRSLEKAQQKVEGHNYEMRKNLLRFDDV MNDQRKIIYEQRTEIIKSKDSHGFLNSTTEELAQKIVLTFMPVGSYREDWDIENLSVELHRVFSIKFDHNVVSKNDVTEE EITKIVIQMAHDIYKSKEEAYSSELMHNAVKYILLTTLDQVWKDHLYSLDHLRQGISLRAYGQKDPLSEYKREAFNLFEQ MLNNLKELFIQTVYHFHIDLKNVQKEDVLLEYKKLQKNMRESREDPAFSKYNAGSSIETDLKPVVSRIDPKDRNPDDPTS WGRVSRNELCPCGSGKKYKYCHGANE
Sequences:
>Translated_906_residues MLSILKKLFGTANDRTVKKLFSEITKINSLEPAIQKLSDEELKNKTVEFKEKLKNGATLDDIVYEAFAVVREAAKRVCGM RHFDVQLIGGLILHRGMITEMRTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLARRDSASMGKIYNFLGLSVGCIVGGM PDEVKRAAYNADITHATNNELGFDYLRDNMKYSLQERVLRPFNFAIIDEVDSILIDEARTPLVISGPVNDNAELYGKIDK IVRLLNASDFEKDEKLKTINLTETGITHIESLLSKESIIKPDTSLYDFENLTLVHYVNQALRAHNMFTVNVDYLVREGKV MIIDEFTGRVMEGRRYSEGLHQALEAKENVKIQNENQTLASITFQNYFRNYPKLSGMTGTAMTEAPELKDIYNLDVVAVP THNKVTRLDLDDEIYGSKKEKYDAILKLIRDCYDRGQPILVGTISIEKSEELSSVLNKEKIPHKVLNAKFHEQEAFIIAQ AGRFKAVTIATNMAGRGTDIMLGGNPEMLIEQLDKEHNYEAKIAEIKAQIAEEKKQVIEAGGLFVIGTERHESRRIDNQL RGRSGRQGDPGKTKFFLSLDDDLMRIFASDRISGVLRTLGLKDGEAIHHPMISRSLEKAQQKVEGHNYEMRKNLLRFDDV MNDQRKIIYEQRTEIIKSKDSHGFLNSTTEELAQKIVLTFMPVGSYREDWDIENLSVELHRVFSIKFDHNVVSKNDVTEE EITKIVIQMAHDIYKSKEEAYSSELMHNAVKYILLTTLDQVWKDHLYSLDHLRQGISLRAYGQKDPLSEYKREAFNLFEQ MLNNLKELFIQTVYHFHIDLKNVQKEDVLLEYKKLQKNMRESREDPAFSKYNAGSSIETDLKPVVSRIDPKDRNPDDPTS WGRVSRNELCPCGSGKKYKYCHGANE >Mature_906_residues MLSILKKLFGTANDRTVKKLFSEITKINSLEPAIQKLSDEELKNKTVEFKEKLKNGATLDDIVYEAFAVVREAAKRVCGM RHFDVQLIGGLILHRGMITEMRTGEGKTLVATLPAYLNALTGKGVHVVTVNDYLARRDSASMGKIYNFLGLSVGCIVGGM PDEVKRAAYNADITHATNNELGFDYLRDNMKYSLQERVLRPFNFAIIDEVDSILIDEARTPLVISGPVNDNAELYGKIDK IVRLLNASDFEKDEKLKTINLTETGITHIESLLSKESIIKPDTSLYDFENLTLVHYVNQALRAHNMFTVNVDYLVREGKV MIIDEFTGRVMEGRRYSEGLHQALEAKENVKIQNENQTLASITFQNYFRNYPKLSGMTGTAMTEAPELKDIYNLDVVAVP THNKVTRLDLDDEIYGSKKEKYDAILKLIRDCYDRGQPILVGTISIEKSEELSSVLNKEKIPHKVLNAKFHEQEAFIIAQ AGRFKAVTIATNMAGRGTDIMLGGNPEMLIEQLDKEHNYEAKIAEIKAQIAEEKKQVIEAGGLFVIGTERHESRRIDNQL RGRSGRQGDPGKTKFFLSLDDDLMRIFASDRISGVLRTLGLKDGEAIHHPMISRSLEKAQQKVEGHNYEMRKNLLRFDDV MNDQRKIIYEQRTEIIKSKDSHGFLNSTTEELAQKIVLTFMPVGSYREDWDIENLSVELHRVFSIKFDHNVVSKNDVTEE EITKIVIQMAHDIYKSKEEAYSSELMHNAVKYILLTTLDQVWKDHLYSLDHLRQGISLRAYGQKDPLSEYKREAFNLFEQ MLNNLKELFIQTVYHFHIDLKNVQKEDVLLEYKKLQKNMRESREDPAFSKYNAGSSIETDLKPVVSRIDPKDRNPDDPTS WGRVSRNELCPCGSGKKYKYCHGANE
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=919, Percent_Identity=51.1425462459195, Blast_Score=920, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 103345; Mature: 103345
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSILKKLFGTANDRTVKKLFSEITKINSLEPAIQKLSDEELKNKTVEFKEKLKNGATLD CHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHH DIVYEAFAVVREAAKRVCGMRHFDVQLIGGLILHRGMITEMRTGEGKTLVATLPAYLNAL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEEEHHHHHHHH TGKGVHVVTVNDYLARRDSASMGKIYNFLGLSVGCIVGGMPDEVKRAAYNADITHATNNE CCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC LGFDYLRDNMKYSLQERVLRPFNFAIIDEVDSILIDEARTPLVISGPVNDNAELYGKIDK CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH IVRLLNASDFEKDEKLKTINLTETGITHIESLLSKESIIKPDTSLYDFENLTLVHYVNQA HHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH LRAHNMFTVNVDYLVREGKVMIIDEFTGRVMEGRRYSEGLHQALEAKENVKIQNENQTLA HHHCCEEEEEHHHEEECCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHCCEEECCCCCHH SITFQNYFRNYPKLSGMTGTAMTEAPELKDIYNLDVVAVPTHNKVTRLDLDDEIYGSKKE HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCEEEECCCHHHCCCCHH KYDAILKLIRDCYDRGQPILVGTISIEKSEELSSVLNKEKIPHKVLNAKFHEQEAFIIAQ HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHCCHHCCCCEEEEEE AGRFKAVTIATNMAGRGTDIMLGGNPEMLIEQLDKEHNYEAKIAEIKAQIAEEKKQVIEA CCCEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GGLFVIGTERHESRRIDNQLRGRSGRQGDPGKTKFFLSLDDDLMRIFASDRISGVLRTLG CCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHC LKDGEAIHHPMISRSLEKAQQKVEGHNYEMRKNLLRFDDVMNDQRKIIYEQRTEIIKSKD CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC SHGFLNSTTEELAQKIVLTFMPVGSYREDWDIENLSVELHRVFSIKFDHNVVSKNDVTEE CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEEEEECCCCCCCCCCCHH EITKIVIQMAHDIYKSKEEAYSSELMHNAVKYILLTTLDQVWKDHLYSLDHLRQGISLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE YGQKDPLSEYKREAFNLFEQMLNNLKELFIQTVYHFHIDLKNVQKEDVLLEYKKLQKNMR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHH ESREDPAFSKYNAGSSIETDLKPVVSRIDPKDRNPDDPTSWGRVSRNELCPCGSGKKYKY HCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC CHGANE CCCCCC >Mature Secondary Structure MLSILKKLFGTANDRTVKKLFSEITKINSLEPAIQKLSDEELKNKTVEFKEKLKNGATLD CHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCHH DIVYEAFAVVREAAKRVCGMRHFDVQLIGGLILHRGMITEMRTGEGKTLVATLPAYLNAL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEEEHHHHHHHH TGKGVHVVTVNDYLARRDSASMGKIYNFLGLSVGCIVGGMPDEVKRAAYNADITHATNNE CCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC LGFDYLRDNMKYSLQERVLRPFNFAIIDEVDSILIDEARTPLVISGPVNDNAELYGKIDK CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH IVRLLNASDFEKDEKLKTINLTETGITHIESLLSKESIIKPDTSLYDFENLTLVHYVNQA HHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH LRAHNMFTVNVDYLVREGKVMIIDEFTGRVMEGRRYSEGLHQALEAKENVKIQNENQTLA HHHCCEEEEEHHHEEECCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHCCEEECCCCCHH SITFQNYFRNYPKLSGMTGTAMTEAPELKDIYNLDVVAVPTHNKVTRLDLDDEIYGSKKE HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCCEEEECCCHHHCCCCHH KYDAILKLIRDCYDRGQPILVGTISIEKSEELSSVLNKEKIPHKVLNAKFHEQEAFIIAQ HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHCCHHCCCCEEEEEE AGRFKAVTIATNMAGRGTDIMLGGNPEMLIEQLDKEHNYEAKIAEIKAQIAEEKKQVIEA CCCEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GGLFVIGTERHESRRIDNQLRGRSGRQGDPGKTKFFLSLDDDLMRIFASDRISGVLRTLG CCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHC LKDGEAIHHPMISRSLEKAQQKVEGHNYEMRKNLLRFDDVMNDQRKIIYEQRTEIIKSKD CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC SHGFLNSTTEELAQKIVLTFMPVGSYREDWDIENLSVELHRVFSIKFDHNVVSKNDVTEE CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEEEEECCCCCCCCCCCHH EITKIVIQMAHDIYKSKEEAYSSELMHNAVKYILLTTLDQVWKDHLYSLDHLRQGISLRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE YGQKDPLSEYKREAFNLFEQMLNNLKELFIQTVYHFHIDLKNVQKEDVLLEYKKLQKNMR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHH ESREDPAFSKYNAGSSIETDLKPVVSRIDPKDRNPDDPTSWGRVSRNELCPCGSGKKYKY HCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC CHGANE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA