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The map label for this gene is 15892796

Identifier: 15892796

GI number: 15892796

Start: 820368

End: 820862

Strand: Reverse

Name: 15892796

Synonym: RC0873

Alternate gene names: NA

Gene position: 820862-820368 (Counterclockwise)

Preceding gene: 15892797

Following gene: 15892795

Centisome position: 64.7

GC content: 29.9

Gene sequence:

>495_bases
TTGCAGGACGTAATACAAGATTTTGATATGATTACTAATGGATTAAATAGAGAAGAAAAAGCAGCTTTGAAAACAAGATT
CAGTTGCTCAAAGATGCTTGCTCAAACAAAGGAAGCTATTTATGCCAAAGCATTTGATATTTCAACGCACTATTTAAAAA
CATTTAAAGGCACAGGTTTAAAAGGTATGTTAATAGCTCCTTCTAGATTAATTGCCGTTCGTTTTAAAAAATTTTTAGAT
GATATAGGACAAGTAAGTTCTGAAGTTGTTATATCTGCTACTGATGACCGGGACGGTTATAAAGATATTGAAAGCGAAAA
TGAAGTAGATAAATTTATAAAAAACATGAGGGAACAATATGGAGTAAAATTCAATAATAGAATTATTAAAAAATTTAAAA
GTTCCGATGATCCTGAAATTTTAATTGTAGTTTCAAAATTACTAACCGGTTTTGATGCACCGCGTAATGTCGTTATTTAC
ATATGCAAAGAATGA

Upstream 100 bases:

>100_bases
GGTAGCCTTAAAGAAAAATTTACAAAATCTTGACTCTGTAAGATTTGGTATGTAGGTATCAAGGGGAGTAAGTACTACAA
ATAATTTAGTAGTTGAGAGT

Downstream 100 bases:

>100_bases
AAAGAGCATAGTCTTTTACAAGCAATTGCTCGTGCGAATCGTCTATTTGAAGAAAAAGGGAAAACTAAAGAATACGGTTA
CATAATTGACTATGTAGGGT

Product: putative type I restriction enzyme restriction subunit

Products: NA

Alternate protein names: Type I Site-Specific Deoxyribonuclease HsdR Family; Type I Restriction Restriction Subunit; Type I Site-Specific Deoxyribonuclease HsdR; Type I Restriction- System R Subunit; Type I Site-Specific Restriction- System R Subunit; Type I Restriction- R Subunit; Type I Restriction- System Subunit R; HsdR Protein; Type I Restriction; Type I Restriction Restriction Subunit; Type I Restriction- System Restriction Subunit

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MQDVIQDFDMITNGLNREEKAALKTRFSCSKMLAQTKEAIYAKAFDISTHYLKTFKGTGLKGMLIAPSRLIAVRFKKFLD
DIGQVSSEVVISATDDRDGYKDIESENEVDKFIKNMREQYGVKFNNRIIKKFKSSDDPEILIVVSKLLTGFDAPRNVVIY
ICKE

Sequences:

>Translated_164_residues
MQDVIQDFDMITNGLNREEKAALKTRFSCSKMLAQTKEAIYAKAFDISTHYLKTFKGTGLKGMLIAPSRLIAVRFKKFLD
DIGQVSSEVVISATDDRDGYKDIESENEVDKFIKNMREQYGVKFNNRIIKKFKSSDDPEILIVVSKLLTGFDAPRNVVIY
ICKE
>Mature_164_residues
MQDVIQDFDMITNGLNREEKAALKTRFSCSKMLAQTKEAIYAKAFDISTHYLKTFKGTGLKGMLIAPSRLIAVRFKKFLD
DIGQVSSEVVISATDDRDGYKDIESENEVDKFIKNMREQYGVKFNNRIIKKFKSSDDPEILIVVSKLLTGFDAPRNVVIY
ICKE

Specific function: Unknown

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18703; Mature: 18703

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDVIQDFDMITNGLNREEKAALKTRFSCSKMLAQTKEAIYAKAFDISTHYLKTFKGTGL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGMLIAPSRLIAVRFKKFLDDIGQVSSEVVISATDDRDGYKDIESENEVDKFIKNMREQY
CEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
GVKFNNRIIKKFKSSDDPEILIVVSKLLTGFDAPRNVVIYICKE
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MQDVIQDFDMITNGLNREEKAALKTRFSCSKMLAQTKEAIYAKAFDISTHYLKTFKGTGL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KGMLIAPSRLIAVRFKKFLDDIGQVSSEVVISATDDRDGYKDIESENEVDKFIKNMREQY
CEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
GVKFNNRIIKKFKSSDDPEILIVVSKLLTGFDAPRNVVIYICKE
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA