| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892693
Identifier: 15892693
GI number: 15892693
Start: 731053
End: 731619
Strand: Reverse
Name: 15892693
Synonym: RC0770
Alternate gene names: NA
Gene position: 731619-731053 (Counterclockwise)
Preceding gene: 15892694
Following gene: 15892692
Centisome position: 57.66
GC content: 31.39
Gene sequence:
>567_bases TTGAAATATGTCAACAGCAAAATAGTGAAGATCCTTTCGCAATTAACGAGTCAGAAATATTTAATCAAAAATGCAAGGTT AAGCAGTACGGAATTTGAGCAATTTAATAGCTTTTTTAAAGCAAGATGTGGAAGTAATTTTGCTTTGAGATTTAGGAATT ATGCAGATTATAGAGGAATTAACGAAGTTATTGCTAAAGGGGACGGTAATTTAAATAAATTTCAGCTAAGGAAGATATAT GGCAATCCTATTGCTCCTTACGAACGAGTTATCACTAAACCGGTTAATAATAGTGTCATGCTATACATTAATAATGTAAG AACTATGGGCATTGTAGATTACAACGATGGTATAGTGAACTTACCAAGTCCCTTAGGTCAAGATGTAATTTTAACTACTG ATTTTACTTTTGACGTAGCAGTTAGATTGAGTATAGATAGTTTTGAATATTCTTATTGTAGACGGTTCTATAGCGTTATA CAACATAGAGTTAGTGGAGGTGATTATATGAGTATTGCGATTGAAGAGGTAATTACAAAGCTTACGAATTTTTTGTTTTC AAATTAA
Upstream 100 bases:
>100_bases AGAGAACTTAAGCATGAACAATGTATAAATACCTCCTTATTGTCAGTAAATATTAATGAAAAATTTCTCAAACCAAGTGT TGTTACTCACGTAAAAACTA
Downstream 100 bases:
>100_bases GCGAGCTAGTGGTGAGGAATTAAACTCAACAAATAGCGATCATGCTATAAAAAGTGAAGAGAGAGTGTTTTTACCGAATT CCAGTTTAGATTTAAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKYVNSKIVKILSQLTSQKYLIKNARLSSTEFEQFNSFFKARCGSNFALRFRNYADYRGINEVIAKGDGNLNKFQLRKIY GNPIAPYERVITKPVNNSVMLYINNVRTMGIVDYNDGIVNLPSPLGQDVILTTDFTFDVAVRLSIDSFEYSYCRRFYSVI QHRVSGGDYMSIAIEEVITKLTNFLFSN
Sequences:
>Translated_188_residues MKYVNSKIVKILSQLTSQKYLIKNARLSSTEFEQFNSFFKARCGSNFALRFRNYADYRGINEVIAKGDGNLNKFQLRKIY GNPIAPYERVITKPVNNSVMLYINNVRTMGIVDYNDGIVNLPSPLGQDVILTTDFTFDVAVRLSIDSFEYSYCRRFYSVI QHRVSGGDYMSIAIEEVITKLTNFLFSN >Mature_188_residues MKYVNSKIVKILSQLTSQKYLIKNARLSSTEFEQFNSFFKARCGSNFALRFRNYADYRGINEVIAKGDGNLNKFQLRKIY GNPIAPYERVITKPVNNSVMLYINNVRTMGIVDYNDGIVNLPSPLGQDVILTTDFTFDVAVRLSIDSFEYSYCRRFYSVI QHRVSGGDYMSIAIEEVITKLTNFLFSN
Specific function: Unknown
COG id: COG5448
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21613; Mature: 21613
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVNSKIVKILSQLTSQKYLIKNARLSSTEFEQFNSFFKARCGSNFALRFRNYADYRGI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH NEVIAKGDGNLNKFQLRKIYGNPIAPYERVITKPVNNSVMLYINNVRTMGIVDYNDGIVN HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCEEE LPSPLGQDVILTTDFTFDVAVRLSIDSFEYSYCRRFYSVIQHRVSGGDYMSIAIEEVITK CCCCCCCCEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LTNFLFSN HHHHHHCC >Mature Secondary Structure MKYVNSKIVKILSQLTSQKYLIKNARLSSTEFEQFNSFFKARCGSNFALRFRNYADYRGI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCH NEVIAKGDGNLNKFQLRKIYGNPIAPYERVITKPVNNSVMLYINNVRTMGIVDYNDGIVN HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCEEE LPSPLGQDVILTTDFTFDVAVRLSIDSFEYSYCRRFYSVIQHRVSGGDYMSIAIEEVITK CCCCCCCCEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LTNFLFSN HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA