| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892582
Identifier: 15892582
GI number: 15892582
Start: 640270
End: 640854
Strand: Reverse
Name: 15892582
Synonym: RC0659
Alternate gene names: NA
Gene position: 640854-640270 (Counterclockwise)
Preceding gene: 15892583
Following gene: 15892581
Centisome position: 50.51
GC content: 27.86
Gene sequence:
>585_bases ATGTCTCTACAATCATCGATTTATCGGATTAGACATCTTGCCAAACCAGCTTATAGAGAGGAATTTAAAGGAGACATAGA ATGTAGCACCGCAGCGTACAAAGAAGTACTTGAGGATACGAGTACCGATTCGACGTCTAAATTACCTCTAGAAGCGAAGT TTGGAAAGATGTCTATTATTAAACTTGTTTTACTTCTTATAATTAGTACTATAATATATGCTAATGATAAAAATATTTCA AATTTACATATCACATCTGATAGTTTAATTATTGATAGAACCAAACAAAAAGCAGCATATCTTGGAAATGTTATTGTTTA CTTCGATAATGCGATACTTAGAACGAAAGAATTATATATTTTTTATAAAACAATAGATGAAAAGCAAACTATTGATCATA TAGTTGTCCCTACTAAATTGACTGTAGAAAGAAAAATAAATAATGAATTATTACTTGCAGATAGTGCTAAATATTTTTGC GATAATAAACAACTTATTCTACTTGGTAATGTAATATTACAGCGTGACGATAATGTTTTAAAAACTAATAAACTAATCTA CTATGTAGATATTATTAAAAAATAG
Upstream 100 bases:
>100_bases ACCGGTCATTCCCCTGCTAAGTTACTTTACAAAAACTCTTCAATTACTTCGGATAGTTTTAATACAAAAGATGAAAATAA TATTATAATTTTTAAAGGCA
Downstream 100 bases:
>100_bases AGCTATTTACCGTTGGTACGTCATTGCAGCAAGCGATTGCAAGAAGTGTGACAATCCAGAAAATAATTAAAAAAATGCTA AAGATTAATATTTTTAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSLQSSIYRIRHLAKPAYREEFKGDIECSTAAYKEVLEDTSTDSTSKLPLEAKFGKMSIIKLVLLLIISTIIYANDKNIS NLHITSDSLIIDRTKQKAAYLGNVIVYFDNAILRTKELYIFYKTIDEKQTIDHIVVPTKLTVERKINNELLLADSAKYFC DNKQLILLGNVILQRDDNVLKTNKLIYYVDIIKK
Sequences:
>Translated_194_residues MSLQSSIYRIRHLAKPAYREEFKGDIECSTAAYKEVLEDTSTDSTSKLPLEAKFGKMSIIKLVLLLIISTIIYANDKNIS NLHITSDSLIIDRTKQKAAYLGNVIVYFDNAILRTKELYIFYKTIDEKQTIDHIVVPTKLTVERKINNELLLADSAKYFC DNKQLILLGNVILQRDDNVLKTNKLIYYVDIIKK >Mature_193_residues SLQSSIYRIRHLAKPAYREEFKGDIECSTAAYKEVLEDTSTDSTSKLPLEAKFGKMSIIKLVLLLIISTIIYANDKNISN LHITSDSLIIDRTKQKAAYLGNVIVYFDNAILRTKELYIFYKTIDEKQTIDHIVVPTKLTVERKINNELLLADSAKYFCD NKQLILLGNVILQRDDNVLKTNKLIYYVDIIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005653 [H]
Pfam domain/function: PF03968 OstA [H]
EC number: NA
Molecular weight: Translated: 22296; Mature: 22165
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQSSIYRIRHLAKPAYREEFKGDIECSTAAYKEVLEDTSTDSTSKLPLEAKFGKMSII CCHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH KLVLLLIISTIIYANDKNISNLHITSDSLIIDRTKQKAAYLGNVIVYFDNAILRTKELYI HHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCHHHHHHHCCEEEEECCCEEEEEEEEE FYKTIDEKQTIDHIVVPTKLTVERKINNELLLADSAKYFCDNKQLILLGNVILQRDDNVL EEEECCCCCCCCEEEECCEEEEEEECCCEEEEECCCHHHCCCCCEEEEEEEEEECCCCEE KTNKLIYYVDIIKK ECCCEEEEEEEECC >Mature Secondary Structure SLQSSIYRIRHLAKPAYREEFKGDIECSTAAYKEVLEDTSTDSTSKLPLEAKFGKMSII CHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH KLVLLLIISTIIYANDKNISNLHITSDSLIIDRTKQKAAYLGNVIVYFDNAILRTKELYI HHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCHHHHHHHCCEEEEECCCEEEEEEEEE FYKTIDEKQTIDHIVVPTKLTVERKINNELLLADSAKYFCDNKQLILLGNVILQRDDNVL EEEECCCCCCCCEEEECCEEEEEEECCCEEEEECCCHHHCCCCCEEEEEEEEEECCCCEE KTNKLIYYVDIIKK ECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]