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The map label for this gene is 15892393

Identifier: 15892393

GI number: 15892393

Start: 466453

End: 467016

Strand: Reverse

Name: 15892393

Synonym: RC0470

Alternate gene names: NA

Gene position: 467016-466453 (Counterclockwise)

Preceding gene: 15892395

Following gene: 15892391

Centisome position: 36.81

GC content: 30.32

Gene sequence:

>564_bases
TTGGATAAATATATAGCAAATTTACCGACTAAAATTTCCAATCAAACAGATTCTAAATATTGGACATATGATATAGGTTG
TTCTACCGATGTAAGTTTGCATTGGAAACACACTAATTGGTTAAAGATATTTAAGTTCTTTAAAGAAGATCCACGTGCTA
AAGCAACTTTTGCTACTAAATATGTCAATCCTAAATTACTTAATTTTAATCCTGAAAACAAAATAAGGATTAGATTTAGT
TTGATACCGACAAGAATGCGTGAGATATTAGAGCCAAAAACGAGTTCAATTATCGAGAGAATAAAAGCGGTGAATATTTT
TATTGAAGCAGGTTACGAAATTCATCTAAACTTTGCTCCTATTATTGCTTATGAAGGCTGGCTTACCGAATATGCAAAGT
TATTTGAAGATTTAGCTCAATACATAAACAACCAATATAAACCGTTTATAAAAGCGGAATGCATATTTTTAACGCATAAC
GATAAGCAGCATGAAAGAAATATTGCCTCAAATAGATTAGAGAGTGAAGCTTTAATTTGGCAACCAAATTATACAGGAAA
ATAA

Upstream 100 bases:

>100_bases
TGTATGGCTGTGCCGGAGGTTGCAGAAATAGTTATTGTTATGTTATGCATCATAACTATGAGACATTATATATCAATGAA
AATATAGATTACTTGACGTA

Downstream 100 bases:

>100_bases
AGTAAGCAAATATGGAGGCAAGGCGGTACGTTATAAAGCCGGTATTAAGAGTAGTTTTATCTAACGATGGAGTGTGTTGC
ATGACAGGTTGCGCCCATGG

Product: putative spore photoproduct lyase

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM; Radical Sam Domain Protein; DNA Repair Photolyase

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MDKYIANLPTKISNQTDSKYWTYDIGCSTDVSLHWKHTNWLKIFKFFKEDPRAKATFATKYVNPKLLNFNPENKIRIRFS
LIPTRMREILEPKTSSIIERIKAVNIFIEAGYEIHLNFAPIIAYEGWLTEYAKLFEDLAQYINNQYKPFIKAECIFLTHN
DKQHERNIASNRLESEALIWQPNYTGK

Sequences:

>Translated_187_residues
MDKYIANLPTKISNQTDSKYWTYDIGCSTDVSLHWKHTNWLKIFKFFKEDPRAKATFATKYVNPKLLNFNPENKIRIRFS
LIPTRMREILEPKTSSIIERIKAVNIFIEAGYEIHLNFAPIIAYEGWLTEYAKLFEDLAQYINNQYKPFIKAECIFLTHN
DKQHERNIASNRLESEALIWQPNYTGK
>Mature_187_residues
MDKYIANLPTKISNQTDSKYWTYDIGCSTDVSLHWKHTNWLKIFKFFKEDPRAKATFATKYVNPKLLNFNPENKIRIRFS
LIPTRMREILEPKTSSIIERIKAVNIFIEAGYEIHLNFAPIIAYEGWLTEYAKLFEDLAQYINNQYKPFIKAECIFLTHN
DKQHERNIASNRLESEALIWQPNYTGK

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22158; Mature: 22158

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKYIANLPTKISNQTDSKYWTYDIGCSTDVSLHWKHTNWLKIFKFFKEDPRAKATFATK
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEE
YVNPKLLNFNPENKIRIRFSLIPTRMREILEPKTSSIIERIKAVNIFIEAGYEIHLNFAP
CCCCEEEEECCCCEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHEEEEECCEEEEEEEEE
IIAYEGWLTEYAKLFEDLAQYINNQYKPFIKAECIFLTHNDKQHERNIASNRLESEALIW
EEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEE
QPNYTGK
CCCCCCC
>Mature Secondary Structure
MDKYIANLPTKISNQTDSKYWTYDIGCSTDVSLHWKHTNWLKIFKFFKEDPRAKATFATK
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEE
YVNPKLLNFNPENKIRIRFSLIPTRMREILEPKTSSIIERIKAVNIFIEAGYEIHLNFAP
CCCCEEEEECCCCEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHEEEEECCEEEEEEEEE
IIAYEGWLTEYAKLFEDLAQYINNQYKPFIKAECIFLTHNDKQHERNIASNRLESEALIW
EEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEE
QPNYTGK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA