| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892332
Identifier: 15892332
GI number: 15892332
Start: 409029
End: 410009
Strand: Reverse
Name: 15892332
Synonym: RC0409
Alternate gene names: NA
Gene position: 410009-409029 (Counterclockwise)
Preceding gene: 15892338
Following gene: 15892330
Centisome position: 32.32
GC content: 30.28
Gene sequence:
>981_bases ATGTTATTTAAAATATTATACAAAACAGTTATTACATTAGCTCTAATTTATTTCATACTGATTATTTTAGAATATGCACG TCAAGGTTTTCTTAATGACTTATCGTTACAAAAAGTAGATTTATCTATTCAGAATTCCATAAAAGAACCAATTTATTTAG TTTCTTATGCCGACGGTCTGGAGTATGTTTATCGTAATCAAAATGCAACCACTCATTATGCAATTAATAAAGGTATAGAC TTCATATTTAACTATAAGAAAAAGCACATAAATCAAGCGTTTATAGAAAAAAACCAAGAAATTTTTAATGAACCTGCAGG AGCGGGGTTATGGCTATGGAAGCCTTATATTATACTTGAAACAATGAAAAATGCACCAAAAGGAGCTATTATAGTATATT TAGATTCAGCATTTGTTATTAAAAAGCATATCAGTAATTTAACAAATCTTTTAGGCGATAATGATATATTACTGGTACAT GATCGCAATCGTAAAAACGGTAGTTTTGTTAAAGGCGAAACTTTTGCTTTAATGGATTGCCTTACAGACGAATGCAGAAA TGACGATCACATTTGGAGTGCCGTTATTATTGTGCGTAATACCAAGCTTTCTCGTTCTTTCATTGAAAAATGGCTAAAAA GTTGTGAAGATATTAGAATTCTTTCAGGTAAAAATTATAATATCCATCCTAATTACGATGAATATAAATGGCATCATTCC GATCAATCGGTACTGAGCCTTATATATCATAAAAATCCACAATCGGTTAAAGTAATAGAATATGAAAAAACAACACCTTC TTTATCTTGGTTCCACCGTAAATATTCAAATAGCTCACCGTTAAAACCTTGGTATAGCATATACGGTATAGATCCTATAA TTAATTTTAATACTAACGGCAAAGTTTTACCTGCTACCTCTCTTATAAATACTCCGATGATTGTTAGACTTCGTAAATGG GTTATCGAGTATATTCAATGA
Upstream 100 bases:
>100_bases ACTCCTGAGATTGCTTCGTCAATACTTCGTATTTCCTCGCAATGACGCTTTACTAATCCACCTGGGAATGAAAAAATGCT TCAAATAATGCAAAAATTAT
Downstream 100 bases:
>100_bases GCCGGTGTTGTTGCATAATTCCAAAGCCGTCATTACGAGCGAACGTAGAGAGCGTGGCAATCTCATGAAATAATCACAAA CTCCTGAGATTGCTTCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MLFKILYKTVITLALIYFILIILEYARQGFLNDLSLQKVDLSIQNSIKEPIYLVSYADGLEYVYRNQNATTHYAINKGID FIFNYKKKHINQAFIEKNQEIFNEPAGAGLWLWKPYIILETMKNAPKGAIIVYLDSAFVIKKHISNLTNLLGDNDILLVH DRNRKNGSFVKGETFALMDCLTDECRNDDHIWSAVIIVRNTKLSRSFIEKWLKSCEDIRILSGKNYNIHPNYDEYKWHHS DQSVLSLIYHKNPQSVKVIEYEKTTPSLSWFHRKYSNSSPLKPWYSIYGIDPIINFNTNGKVLPATSLINTPMIVRLRKW VIEYIQ
Sequences:
>Translated_326_residues MLFKILYKTVITLALIYFILIILEYARQGFLNDLSLQKVDLSIQNSIKEPIYLVSYADGLEYVYRNQNATTHYAINKGID FIFNYKKKHINQAFIEKNQEIFNEPAGAGLWLWKPYIILETMKNAPKGAIIVYLDSAFVIKKHISNLTNLLGDNDILLVH DRNRKNGSFVKGETFALMDCLTDECRNDDHIWSAVIIVRNTKLSRSFIEKWLKSCEDIRILSGKNYNIHPNYDEYKWHHS DQSVLSLIYHKNPQSVKVIEYEKTTPSLSWFHRKYSNSSPLKPWYSIYGIDPIINFNTNGKVLPATSLINTPMIVRLRKW VIEYIQ >Mature_326_residues MLFKILYKTVITLALIYFILIILEYARQGFLNDLSLQKVDLSIQNSIKEPIYLVSYADGLEYVYRNQNATTHYAINKGID FIFNYKKKHINQAFIEKNQEIFNEPAGAGLWLWKPYIILETMKNAPKGAIIVYLDSAFVIKKHISNLTNLLGDNDILLVH DRNRKNGSFVKGETFALMDCLTDECRNDDHIWSAVIIVRNTKLSRSFIEKWLKSCEDIRILSGKNYNIHPNYDEYKWHHS DQSVLSLIYHKNPQSVKVIEYEKTTPSLSWFHRKYSNSSPLKPWYSIYGIDPIINFNTNGKVLPATSLINTPMIVRLRKW VIEYIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38093; Mature: 38093
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFKILYKTVITLALIYFILIILEYARQGFLNDLSLQKVDLSIQNSIKEPIYLVSYADGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHCCCCEEEEEECCCH EYVYRNQNATTHYAINKGIDFIFNYKKKHINQAFIEKNQEIFNEPAGAGLWLWKPYIILE HHHHCCCCCCEEEEECCCCHHEEHHHHHHHHHHHHHCCHHHHCCCCCCCEEHHHHHHHHH TMKNAPKGAIIVYLDSAFVIKKHISNLTNLLGDNDILLVHDRNRKNGSFVKGETFALMDC HHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHH LTDECRNDDHIWSAVIIVRNTKLSRSFIEKWLKSCEDIRILSGKNYNIHPNYDEYKWHHS HHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECC DQSVLSLIYHKNPQSVKVIEYEKTTPSLSWFHRKYSNSSPLKPWYSIYGIDPIINFNTNG CHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHEECCCEEEEECCCC KVLPATSLINTPMIVRLRKWVIEYIQ CEEECHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLFKILYKTVITLALIYFILIILEYARQGFLNDLSLQKVDLSIQNSIKEPIYLVSYADGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHCCCCEEEEEECCCH EYVYRNQNATTHYAINKGIDFIFNYKKKHINQAFIEKNQEIFNEPAGAGLWLWKPYIILE HHHHCCCCCCEEEEECCCCHHEEHHHHHHHHHHHHHCCHHHHCCCCCCCEEHHHHHHHHH TMKNAPKGAIIVYLDSAFVIKKHISNLTNLLGDNDILLVHDRNRKNGSFVKGETFALMDC HHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEECCCHHHHHHH LTDECRNDDHIWSAVIIVRNTKLSRSFIEKWLKSCEDIRILSGKNYNIHPNYDEYKWHHS HHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEECC DQSVLSLIYHKNPQSVKVIEYEKTTPSLSWFHRKYSNSSPLKPWYSIYGIDPIINFNTNG CHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHEECCCEEEEECCCC KVLPATSLINTPMIVRLRKWVIEYIQ CEEECHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA