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The map label for this gene is n2B [H]

Identifier: 15892205

GI number: 15892205

Start: 286073

End: 287125

Strand: Reverse

Name: n2B [H]

Synonym: RC0282

Alternate gene names: 15892205

Gene position: 287125-286073 (Counterclockwise)

Preceding gene: 15892206

Following gene: 15892200

Centisome position: 22.63

GC content: 27.45

Gene sequence:

>1053_bases
ATGATTAAATCCTCTACTTCATTAATACAAGATTCAAAACAAACTGCTTTACGAGAAGAATTAAAACAGCTGGCAGCAGC
ACTTAATAAACCTAAAAGTTTATTCAAATTCTTTAATCAAAATAACTTAGAAAGCGGAATTTATTTATACGGTCCGGTGG
GCAGCGGTAAAACTATGCTCATGAATTCTTTTTGTGAAGAATTAACCACACCTAAAATAATAATACATTATCAGAACTTT
ATGCAGGAAATTCATAAATCTATGCATAAATTACAAACAGCAAATCAGAAAGATATCATCCCTAAAATTGCTAAAAACTA
TACTAAACAAACTAAAGTGTTATGTATAGATGAGTTTGAAATTAAAGATATTACTGATGCAATGATAATCGGTAGATTAT
TTAATGAATTAATAAAGCAAAATATTTTTATTTTTATAACTTCTAACACGAGTCCCAATAATCTGTACAAAGACGGATTA
CAACGAGAATCTTTCTTACCTTTTATAAAGATAATCAATAATACATTTTATGTTAAATATCTAGATAATCAACATGATTA
TCGATTTGATAAAGCGTTAAGAGTTAAAGAGGCAAGGATAATTTATCCTTTAACTTTAGAAAACCAAAACAAACTTGAAA
AAATTATCACAGATATTAGTGATAATAATCTTGCTCCTCAAAATATACAGGTTCTAGGTAGAGAAATATCCTTTCAAAAA
GTGCATAAAAGAATATTAGTAACAGATTATAATGAATTATTTACAAGAGGCCTAAGCTATATCGATTATGTTAATATTTG
CCAAAATTTTAACGTTATTATAGTGGGGAACGTTCATACTATCGATTCTAACGATACAAATACAGCCGTTAGATTTATCA
ACTTTATCGATAATGCCTATTTCTATAAAATACTCTTATTTATGAGCCTAGAAGATAACCCAAATAAAATATATCAAGGT
TCAGCACGAGCCGCAGAATTTAAACGCACTATTTCAAGACTAAATGAAATGAATAGCGAATCTTATTTATTAAATAATGA
TTTTAAGAATTAA

Upstream 100 bases:

>100_bases
ACGGAGGTGAAATTGATCCACGCAACAAAGCCTTCCTGCTTTTAGCTAGGAACGACATTTTAGAAAAAACCTATAACAAA
CTAGATAAAAAATATTTTGG

Downstream 100 bases:

>100_bases
CTTCAATTTTCGCTAACAAAGCTCTTTAATTACTAATTAAAATTTATTTACAGATGACCTCTAAGAAACTTAATAAATTC
ATCAATATTGATCTTTATAT

Product: putative ATPase n2B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MIKSSTSLIQDSKQTALREELKQLAAALNKPKSLFKFFNQNNLESGIYLYGPVGSGKTMLMNSFCEELTTPKIIIHYQNF
MQEIHKSMHKLQTANQKDIIPKIAKNYTKQTKVLCIDEFEIKDITDAMIIGRLFNELIKQNIFIFITSNTSPNNLYKDGL
QRESFLPFIKIINNTFYVKYLDNQHDYRFDKALRVKEARIIYPLTLENQNKLEKIITDISDNNLAPQNIQVLGREISFQK
VHKRILVTDYNELFTRGLSYIDYVNICQNFNVIIVGNVHTIDSNDTNTAVRFINFIDNAYFYKILLFMSLEDNPNKIYQG
SARAAEFKRTISRLNEMNSESYLLNNDFKN

Sequences:

>Translated_350_residues
MIKSSTSLIQDSKQTALREELKQLAAALNKPKSLFKFFNQNNLESGIYLYGPVGSGKTMLMNSFCEELTTPKIIIHYQNF
MQEIHKSMHKLQTANQKDIIPKIAKNYTKQTKVLCIDEFEIKDITDAMIIGRLFNELIKQNIFIFITSNTSPNNLYKDGL
QRESFLPFIKIINNTFYVKYLDNQHDYRFDKALRVKEARIIYPLTLENQNKLEKIITDISDNNLAPQNIQVLGREISFQK
VHKRILVTDYNELFTRGLSYIDYVNICQNFNVIIVGNVHTIDSNDTNTAVRFINFIDNAYFYKILLFMSLEDNPNKIYQG
SARAAEFKRTISRLNEMNSESYLLNNDFKN
>Mature_350_residues
MIKSSTSLIQDSKQTALREELKQLAAALNKPKSLFKFFNQNNLESGIYLYGPVGSGKTMLMNSFCEELTTPKIIIHYQNF
MQEIHKSMHKLQTANQKDIIPKIAKNYTKQTKVLCIDEFEIKDITDAMIIGRLFNELIKQNIFIFITSNTSPNNLYKDGL
QRESFLPFIKIINNTFYVKYLDNQHDYRFDKALRVKEARIIYPLTLENQNKLEKIITDISDNNLAPQNIQVLGREISFQK
VHKRILVTDYNELFTRGLSYIDYVNICQNFNVIIVGNVHTIDSNDTNTAVRFINFIDNAYFYKILLFMSLEDNPNKIYQG
SARAAEFKRTISRLNEMNSESYLLNNDFKN

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=360, Percent_Identity=30.2777777777778, Blast_Score=165, Evalue=6e-41,
Organism=Escherichia coli, GI1789627, Length=302, Percent_Identity=33.112582781457, Blast_Score=161, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17505769, Length=344, Percent_Identity=30.8139534883721, Blast_Score=165, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6320783, Length=319, Percent_Identity=29.153605015674, Blast_Score=129, Evalue=5e-31,
Organism=Drosophila melanogaster, GI20129913, Length=352, Percent_Identity=27.2727272727273, Blast_Score=139, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 40789; Mature: 40789

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSSTSLIQDSKQTALREELKQLAAALNKPKSLFKFFNQNNLESGIYLYGPVGSGKTML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHH
MNSFCEELTTPKIIIHYQNFMQEIHKSMHKLQTANQKDIIPKIAKNYTKQTKVLCIDEFE
HHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCC
IKDITDAMIIGRLFNELIKQNIFIFITSNTSPNNLYKDGLQRESFLPFIKIINNTFYVKY
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHCCEEEEEE
LDNQHDYRFDKALRVKEARIIYPLTLENQNKLEKIITDISDNNLAPQNIQVLGREISFQK
ECCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHH
VHKRILVTDYNELFTRGLSYIDYVNICQNFNVIIVGNVHTIDSNDTNTAVRFINFIDNAY
HHHHHHEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH
FYKILLFMSLEDNPNKIYQGSARAAEFKRTISRLNEMNSESYLLNNDFKN
HHHHHHHEECCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCC
>Mature Secondary Structure
MIKSSTSLIQDSKQTALREELKQLAAALNKPKSLFKFFNQNNLESGIYLYGPVGSGKTML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHH
MNSFCEELTTPKIIIHYQNFMQEIHKSMHKLQTANQKDIIPKIAKNYTKQTKVLCIDEFE
HHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCC
IKDITDAMIIGRLFNELIKQNIFIFITSNTSPNNLYKDGLQRESFLPFIKIINNTFYVKY
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHCCEEEEEE
LDNQHDYRFDKALRVKEARIIYPLTLENQNKLEKIITDISDNNLAPQNIQVLGREISFQK
ECCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHH
VHKRILVTDYNELFTRGLSYIDYVNICQNFNVIIVGNVHTIDSNDTNTAVRFINFIDNAY
HHHHHHEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH
FYKILLFMSLEDNPNKIYQGSARAAEFKRTISRLNEMNSESYLLNNDFKN
HHHHHHHEECCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]