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The map label for this gene is fdxB [H]

Identifier: 15892184

GI number: 15892184

Start: 265611

End: 265949

Strand: Reverse

Name: fdxB [H]

Synonym: RC0261

Alternate gene names: 15892184

Gene position: 265949-265611 (Counterclockwise)

Preceding gene: 15892185

Following gene: 15892183

Centisome position: 20.96

GC content: 34.51

Gene sequence:

>339_bases
ATGTCAGGAAAAATAAAAGTAACATTTATTATAAATGATGGAGAAGAAAAAACAGTAGAAGCACCGATAGGGCTTTCTAT
TTTAGAAATTGCCCATAGTAACGATCTAGACCTTGAGGGAGCTTGTGAAGGATCGCTTGCTTGTGCTACTTGTCACGTTA
TTTTAGAAGAAGAATTTTACAACAAATTAAAAAAACCTACGGAAGCAGAGGAAGATATGCTTGACTTAGCCTTTGGTCTT
ACCGATACTTCTAGATTGGGATGTCAAATTATTTTAACCGAAGAATTAGACGGCATAAAAGTACGCATTCCTGCTACTAC
TCGTAATATAAAATTATAA

Upstream 100 bases:

>100_bases
TTTGCTAAAAGGCAAAAATATCAATCAAATTAAATAGCCTCAGTTATATATAAAATATTATATATAATCGAACTAATTTA
GATAAGGAAAAATAAGAAGA

Downstream 100 bases:

>100_bases
TGGATTAAAAAAGTGATACGTAAAATACTTCTTTTTGTGTTTTTAGCCTTTACTATAATATGGTTTGCAACTGCATATAC
TATAAAAAATAACGTTGTAA

Product: ferredoxin

Products: NA

Alternate protein names: Adrenodoxin-like protein [H]

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSGKIKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFYNKLKKPTEAEEDMLDLAFGL
TDTSRLGCQIILTEELDGIKVRIPATTRNIKL

Sequences:

>Translated_112_residues
MSGKIKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFYNKLKKPTEAEEDMLDLAFGL
TDTSRLGCQIILTEELDGIKVRIPATTRNIKL
>Mature_111_residues
SGKIKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFYNKLKKPTEAEEDMLDLAFGLT
DTSRLGCQIILTEELDGIKVRIPATTRNIKL

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI4758352, Length=110, Percent_Identity=51.8181818181818, Blast_Score=118, Evalue=1e-27,
Organism=Homo sapiens, GI72534754, Length=106, Percent_Identity=46.2264150943396, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1788874, Length=91, Percent_Identity=46.1538461538462, Blast_Score=70, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17544202, Length=106, Percent_Identity=50.9433962264151, Blast_Score=128, Evalue=7e-31,
Organism=Saccharomyces cerevisiae, GI6325004, Length=108, Percent_Identity=53.7037037037037, Blast_Score=132, Evalue=8e-33,
Organism=Drosophila melanogaster, GI24661503, Length=106, Percent_Identity=41.5094339622642, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281365644, Length=110, Percent_Identity=42.7272727272727, Blast_Score=101, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12264; Mature: 12133

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKIKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFY
CCCCEEEEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECHHHH
NKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRIPATTRNIKL
HHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCEECC
>Mature Secondary Structure 
SGKIKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFY
CCCEEEEEEEECCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECHHHH
NKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRIPATTRNIKL
HHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11319266 [H]