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The map label for this gene is 15892165

Identifier: 15892165

GI number: 15892165

Start: 252255

End: 252887

Strand: Reverse

Name: 15892165

Synonym: RC0242

Alternate gene names: NA

Gene position: 252887-252255 (Counterclockwise)

Preceding gene: 15892167

Following gene: 15892159

Centisome position: 19.93

GC content: 26.7

Gene sequence:

>633_bases
ATGCATATTACTTGCCCAAATTGCCAAACAAGATTTATTGTTACAAGCAATCAAATAGGTATTAACGGACGACGAGTAAA
ATGTTCCAAATGTAGCCATTTGTGGTATCAGAAATTAGACTATAATACTAGTACATTAAATGACTTTAAAGATAAAGTAA
ACACGGGAACTATTAAAACTCCTATTAAAAATCATTACAATGCTAATGTGCCGGTTATTTTACCGTATATTCCTCCTAAG
AAAAAATATAATATATTTCCAATATTATGGACTAGCTTTATAATTTTTTGTTTAGTGATATTACTAATAGATAGCTTTAA
ATTCTTAGATAAATATGATCAATTAAAGATAGAAGAAATTAATTTAGGCAAATCTCGTCATATAGGCGGTATGAAGATAT
TTTATAAATTATCTAATGAGTCTGATTATTTAATTTCCGATCCTATAATCAAAGTAAGAGTAATGGATACTAATAATCAA
GCTTTAGATGAATATGTATCAATTACAAAACTACAAACAAAAATCCCTGCAAAACAAGCAATATATCTAGAAATGAATAT
TGAAGGGATCCCTATTACAGCAAAATATATTGATATTGTTATAGGTAATAGATTAGGACTTTTATTTAAGTGA

Upstream 100 bases:

>100_bases
CAATTTCTTTAATAAGAGAGGACATATCTTTTAACTGTTTTATTGCCAAAAATAATAAATGAGATTATCATGAAGTCAAA
CATAATAATTATAATTAACT

Downstream 100 bases:

>100_bases
GGATGTTGTTGCATAGACCGACAAAATCTACCGTCATCCCGTGGTTTAACCACGTGATCCATCAAAACAATTAAAACACT
ATTGAGTATTGTACGAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MHITCPNCQTRFIVTSNQIGINGRRVKCSKCSHLWYQKLDYNTSTLNDFKDKVNTGTIKTPIKNHYNANVPVILPYIPPK
KKYNIFPILWTSFIIFCLVILLIDSFKFLDKYDQLKIEEINLGKSRHIGGMKIFYKLSNESDYLISDPIIKVRVMDTNNQ
ALDEYVSITKLQTKIPAKQAIYLEMNIEGIPITAKYIDIVIGNRLGLLFK

Sequences:

>Translated_210_residues
MHITCPNCQTRFIVTSNQIGINGRRVKCSKCSHLWYQKLDYNTSTLNDFKDKVNTGTIKTPIKNHYNANVPVILPYIPPK
KKYNIFPILWTSFIIFCLVILLIDSFKFLDKYDQLKIEEINLGKSRHIGGMKIFYKLSNESDYLISDPIIKVRVMDTNNQ
ALDEYVSITKLQTKIPAKQAIYLEMNIEGIPITAKYIDIVIGNRLGLLFK
>Mature_210_residues
MHITCPNCQTRFIVTSNQIGINGRRVKCSKCSHLWYQKLDYNTSTLNDFKDKVNTGTIKTPIKNHYNANVPVILPYIPPK
KKYNIFPILWTSFIIFCLVILLIDSFKFLDKYDQLKIEEINLGKSRHIGGMKIFYKLSNESDYLISDPIIKVRVMDTNNQ
ALDEYVSITKLQTKIPAKQAIYLEMNIEGIPITAKYIDIVIGNRLGLLFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011723 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24268; Mature: 24268

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHITCPNCQTRFIVTSNQIGINGRRVKCSKCSHLWYQKLDYNTSTLNDFKDKVNTGTIKT
CEEECCCCCEEEEEECCEECCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEC
PIKNHYNANVPVILPYIPPKKKYNIFPILWTSFIIFCLVILLIDSFKFLDKYDQLKIEEI
CCCCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCHHCCEEEEEE
NLGKSRHIGGMKIFYKLSNESDYLISDPIIKVRVMDTNNQALDEYVSITKLQTKIPAKQA
CCCCCCCCCCEEEEEEECCCCCEEEECCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEE
IYLEMNIEGIPITAKYIDIVIGNRLGLLFK
EEEEEECCCCEEEHEEEEEEECCCEEEEEC
>Mature Secondary Structure
MHITCPNCQTRFIVTSNQIGINGRRVKCSKCSHLWYQKLDYNTSTLNDFKDKVNTGTIKT
CEEECCCCCEEEEEECCEECCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEC
PIKNHYNANVPVILPYIPPKKKYNIFPILWTSFIIFCLVILLIDSFKFLDKYDQLKIEEI
CCCCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCHHCCEEEEEE
NLGKSRHIGGMKIFYKLSNESDYLISDPIIKVRVMDTNNQALDEYVSITKLQTKIPAKQA
CCCCCCCCCCEEEEEEECCCCCEEEECCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEE
IYLEMNIEGIPITAKYIDIVIGNRLGLLFK
EEEEEECCCCEEEHEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]