Click here to switch to the map view.

The map label for this gene is 15892085

Identifier: 15892085

GI number: 15892085

Start: 160842

End: 161888

Strand: Reverse

Name: 15892085

Synonym: RC0162

Alternate gene names: NA

Gene position: 161888-160842 (Counterclockwise)

Preceding gene: 15892086

Following gene: 15892084

Centisome position: 12.76

GC content: 34.38

Gene sequence:

>1047_bases
ATGAAAATACACGTATTGGAGGATGATAGAACAGGCAACACCCATCAGGCTATTGCACTTGCTGAAAAATTAACGGAAGA
ATATACAACAATTAAGCTTGAATATAATTGCTTAGCTAAGCTACCGAACTTTTTACTAAAATATTATCCTATTCATATAA
AAAGTGAGCTATTGCAGTATCTTTTGGATAAGTCCCCGCCTGATATGATAATTACCGCTGGAAGAAGAACGGCAGTACTA
GCATTTTATTTAAAAAAGAAATTTAAAGATATCAAGTTAATACAAATAATGCATCCTAATCTTCCTTACAATGCATTTGA
TGCCGTTATTCTGCCTTATCATGACCAACGTCATTGCGAAGCCACAAAGTGGCTGAAGCAATCTCAGGGCTTTTTTACTA
GATTGCTTCGTCAATACTTCGTATTTCCTCGCAATGACGACTTTAAAAACATCATCCCCATCAACGGAGCTATCAACAAC
GTAACTGAACAGTTCGCCGCAGCGAACTTGGAACTCCAAAAACATTATCCTAATCTTAAACAGTTTATTGCAGTGATAAT
CGGTGGGAATAATAAAAAATTTAATTTCCATGAAGATGAAGCAGTTTTATTTGCTTCATTATTAAATAAAATATATACTA
ATCAAAAAATACCTTTTTTCATTAGTTTTAGTAGACGTACACCACACACTGTAAAATCAATTATTAAAAATAATGTGCCG
TCCTCCACAATTATTTATTACCCGAACGAAGACACAGGCTATAATCCTTATATAGCTATGCTCTCCAAGGCAAAATATAT
AATCTCTACGGCCGACTCAATCTCAATGTGCAGTGAAGCAGCTTCAAGCGGCAAGCCTCTTTATATATTCTGCCCACCAA
ACTTTAATTCGTCAAAGCATAAGATTTTTATAAAGCAGTTAGTAGAACAGAAGATAGCAAGAATTTTTGATAAGTCGGCT
ATTGCTCTAGAAGAATATAGCTACAAACCCTTAAATGAAGCGGAAAGAGTAGCTGAAATTATTAAATCTTTAATCAAAAG
CTGGTAA

Upstream 100 bases:

>100_bases
TAATCGCTCAAATGCCGATCACACCACAAATAGCCGAGGCTTGCGATAAATCACTACCTCTAACAAACTTATTAACATTA
CCTTTAGAGAAGTATTTACA

Downstream 100 bases:

>100_bases
TTATATGGATAAGATATACAATCATATATATTCATTAATAAGCTAAAATCTTTACCGTTTGTCAACGCAATATGGCTTTT
TGGCTTTTCGTGCTAGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKIHVLEDDRTGNTHQAIALAEKLTEEYTTIKLEYNCLAKLPNFLLKYYPIHIKSELLQYLLDKSPPDMIITAGRRTAVL
AFYLKKKFKDIKLIQIMHPNLPYNAFDAVILPYHDQRHCEATKWLKQSQGFFTRLLRQYFVFPRNDDFKNIIPINGAINN
VTEQFAAANLELQKHYPNLKQFIAVIIGGNNKKFNFHEDEAVLFASLLNKIYTNQKIPFFISFSRRTPHTVKSIIKNNVP
SSTIIYYPNEDTGYNPYIAMLSKAKYIISTADSISMCSEAASSGKPLYIFCPPNFNSSKHKIFIKQLVEQKIARIFDKSA
IALEEYSYKPLNEAERVAEIIKSLIKSW

Sequences:

>Translated_348_residues
MKIHVLEDDRTGNTHQAIALAEKLTEEYTTIKLEYNCLAKLPNFLLKYYPIHIKSELLQYLLDKSPPDMIITAGRRTAVL
AFYLKKKFKDIKLIQIMHPNLPYNAFDAVILPYHDQRHCEATKWLKQSQGFFTRLLRQYFVFPRNDDFKNIIPINGAINN
VTEQFAAANLELQKHYPNLKQFIAVIIGGNNKKFNFHEDEAVLFASLLNKIYTNQKIPFFISFSRRTPHTVKSIIKNNVP
SSTIIYYPNEDTGYNPYIAMLSKAKYIISTADSISMCSEAASSGKPLYIFCPPNFNSSKHKIFIKQLVEQKIARIFDKSA
IALEEYSYKPLNEAERVAEIIKSLIKSW
>Mature_348_residues
MKIHVLEDDRTGNTHQAIALAEKLTEEYTTIKLEYNCLAKLPNFLLKYYPIHIKSELLQYLLDKSPPDMIITAGRRTAVL
AFYLKKKFKDIKLIQIMHPNLPYNAFDAVILPYHDQRHCEATKWLKQSQGFFTRLLRQYFVFPRNDDFKNIIPINGAINN
VTEQFAAANLELQKHYPNLKQFIAVIIGGNNKKFNFHEDEAVLFASLLNKIYTNQKIPFFISFSRRTPHTVKSIIKNNVP
SSTIIYYPNEDTGYNPYIAMLSKAKYIISTADSISMCSEAASSGKPLYIFCPPNFNSSKHKIFIKQLVEQKIARIFDKSA
IALEEYSYKPLNEAERVAEIIKSLIKSW

Specific function: Unknown

COG id: COG3660

COG function: function code M; Predicted nucleoside-diphosphate-sugar epimerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009367 [H]

Pfam domain/function: PF06258 DUF1022 [H]

EC number: NA

Molecular weight: Translated: 40217; Mature: 40217

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHVLEDDRTGNTHQAIALAEKLTEEYTTIKLEYNCLAKLPNFLLKYYPIHIKSELLQY
CEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHH
LLDKSPPDMIITAGRRTAVLAFYLKKKFKDIKLIQIMHPNLPYNAFDAVILPYHDQRHCE
HHCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHH
ATKWLKQSQGFFTRLLRQYFVFPRNDDFKNIIPINGAINNVTEQFAAANLELQKHYPNLK
HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCHHHHCCCHH
QFIAVIIGGNNKKFNFHEDEAVLFASLLNKIYTNQKIPFFISFSRRTPHTVKSIIKNNVP
HEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCC
SSTIIYYPNEDTGYNPYIAMLSKAKYIISTADSISMCSEAASSGKPLYIFCPPNFNSSKH
CCEEEEECCCCCCCCHHHHHHHHCHHEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCHH
KIFIKQLVEQKIARIFDKSAIALEEYSYKPLNEAERVAEIIKSLIKSW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIHVLEDDRTGNTHQAIALAEKLTEEYTTIKLEYNCLAKLPNFLLKYYPIHIKSELLQY
CEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHH
LLDKSPPDMIITAGRRTAVLAFYLKKKFKDIKLIQIMHPNLPYNAFDAVILPYHDQRHCE
HHCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCHHHH
ATKWLKQSQGFFTRLLRQYFVFPRNDDFKNIIPINGAINNVTEQFAAANLELQKHYPNLK
HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCHHHHCCCHH
QFIAVIIGGNNKKFNFHEDEAVLFASLLNKIYTNQKIPFFISFSRRTPHTVKSIIKNNVP
HEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCC
SSTIIYYPNEDTGYNPYIAMLSKAKYIISTADSISMCSEAASSGKPLYIFCPPNFNSSKH
CCEEEEECCCCCCCCHHHHHHHHCHHEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCHH
KIFIKQLVEQKIARIFDKSAIALEEYSYKPLNEAERVAEIIKSLIKSW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]