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The map label for this gene is atpF

Identifier: 15891947

GI number: 15891947

Start: 26192

End: 26686

Strand: Reverse

Name: atpF

Synonym: RC0024

Alternate gene names: 15891947

Gene position: 26686-26192 (Counterclockwise)

Preceding gene: 15891948

Following gene: 15891941

Centisome position: 2.1

GC content: 30.1

Gene sequence:

>495_bases
ATGAATTTCCTAGATGAGAGCTTCTGGCTTGCCGTTAGTTTTGTAATTTTTTTATATTTAGTTTATAGACCGGCAAAAAA
AGCCATTTTAAATTCTTTAGATGCTAAGATTTTAGAAGTCCAAGAAAAAGTTCTACAAGCTGAAAAGTTAAAAGAAGATG
CTGCTTTGCTCTTTAAACACACCAACGCACAAATAAAGAAATTAGAAACTTTACGCTCTCAAATGATAGAAGACAGTAAT
GAAGTTACTAAGAAAATCATTCAAGAAAAAACTAAAGAAATTGAAGAATTTTTAGAGCATAAAAAATCTGATGCTATACA
GTTAATGCAAAACCAAAAATCAACCGCAAGTAAAGAGCTACAAGATGAATTTTGTGATGAAGTGATAAAACTTGTATCCG
AATATTTTCAATCAGTTAAGCTTTCAGAAAGCAATATTGCTAAAAATTTAATGGATAAATCTGATTTTCCTCAGGATGAG
GGTAAAGCTACATAG

Upstream 100 bases:

>100_bases
ATAAAAGCGCAGCAATCATAAAGCTTGCCGTTAATATTATTGAAAAAATAGCTGGCACTAAAGCAGATATGAATTTACTA
CAAAATATAAAAGTAAAATA

Downstream 100 bases:

>100_bases
CCACACTAACCACTAGCTAGCAATTTATTTAAAATTGCTTTATCATTAACACATATCCGTAATATTGAGCCATCAATAAA
ATATTCAGGATGTTCGTTTG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNFLDESFWLAVSFVIFLYLVYRPAKKAILNSLDAKILEVQEKVLQAEKLKEDAALLFKHTNAQIKKLETLRSQMIEDSN
EVTKKIIQEKTKEIEEFLEHKKSDAIQLMQNQKSTASKELQDEFCDEVIKLVSEYFQSVKLSESNIAKNLMDKSDFPQDE
GKAT

Sequences:

>Translated_164_residues
MNFLDESFWLAVSFVIFLYLVYRPAKKAILNSLDAKILEVQEKVLQAEKLKEDAALLFKHTNAQIKKLETLRSQMIEDSN
EVTKKIIQEKTKEIEEFLEHKKSDAIQLMQNQKSTASKELQDEFCDEVIKLVSEYFQSVKLSESNIAKNLMDKSDFPQDE
GKAT
>Mature_164_residues
MNFLDESFWLAVSFVIFLYLVYRPAKKAILNSLDAKILEVQEKVLQAEKLKEDAALLFKHTNAQIKKLETLRSQMIEDSN
EVTKKIIQEKTKEIEEFLEHKKSDAIQLMQNQKSTASKELQDEFCDEVIKLVSEYFQSVKLSESNIAKNLMDKSDFPQDE
GKAT

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_RICCN (Q92JP3)

Other databases:

- EMBL:   AE006914
- PIR:   H97702
- RefSeq:   NP_359661.1
- GeneID:   928641
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0024
- NMPDR:   fig|272944.1.peg.24
- OMA:   SQMIEES
- ProtClustDB:   PRK06568
- BioCyc:   RCON272944:RC0024-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18995; Mature: 18995

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x91f9ed4)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFLDESFWLAVSFVIFLYLVYRPAKKAILNSLDAKILEVQEKVLQAEKLKEDAALLFKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNAQIKKLETLRSQMIEDSNEVTKKIIQEKTKEIEEFLEHKKSDAIQLMQNQKSTASKEL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDEFCDEVIKLVSEYFQSVKLSESNIAKNLMDKSDFPQDEGKAT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCH
>Mature Secondary Structure
MNFLDESFWLAVSFVIFLYLVYRPAKKAILNSLDAKILEVQEKVLQAEKLKEDAALLFKH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNAQIKKLETLRSQMIEDSNEVTKKIIQEKTKEIEEFLEHKKSDAIQLMQNQKSTASKEL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDEFCDEVIKLVSEYFQSVKLSESNIAKNLMDKSDFPQDEGKAT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893