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The map label for this gene is trbL

Identifier: 158425488

GI number: 158425488

Start: 4415454

End: 4416683

Strand: Direct

Name: trbL

Synonym: AZC_3864

Alternate gene names: NA

Gene position: 4415454-4416683 (Clockwise)

Preceding gene: 158425487

Following gene: 158425489

Centisome position: 82.23

GC content: 66.91

Gene sequence:

>1230_bases
ATGAACGGCACCGGCGTCATCGACAACTTTCTGGGCGTCTTCACCTCCTATATTGACAGCGGCTTCGGCCTCCTTGGTGG
CGAGGTCGCTTTCATCGCCACCACGCTCATCGTCATCGACGTGACGCTGGCGGCGCTGTTCTGGTCGTGGGGTGCGGATG
ACGACGTCATCGCCCGGCTCATCAAGAAGACCCTGTTCGTCGGCGTCTTCGCCTACATCATCGGCAATTGGAACAACCTC
GCCCGCATCGTCTTCGAGAGCTTCGCCGGGCTGGGGCTGAAGGGCTCGGGAACGGCATTTTCCGTCAGCGACTTGATGCG
TCCGGGCAAGGTAGCGCAGACCGGGCTCGATGCCGGCCGTCCCTTGCTCGAGTCCATCTCCGATCTGATGGGCTGGATCG
CCTTCTTCGAGAATTTCATCCAGATCGCCTGCCTGCTGTTTGCCTGGGCATTGGTGCTGCTCTCCTTCTTCATCCTCGCC
GTCCAGCTCTTCGTCACCCTGATCGAGTTCAAGCTGACGACGCTCGCCGGCTTCGTGCTGATCCCCTTCGGCCTGTTCGG
CAAGACCGCCTTCATGGCCGAACGGGTGCTGGGCAATGTGGTCTCCTCCGGCATCAAAGTCATGGTGCTCGCGGTCATCA
TCGGCATCGGCTCGACCCTGTTCGGCCAGTTCACGGCGGGCTTCGGCGGACAGACGCCCACCATCGACGACGCCATGGCG
ATCGTGCTGGCCGCGCTATCGCTGCTCGGTCTCGGCATCTTCGGTCCCGGCATTGCCGCCGGCCTTGTCTCCGGTGGTCC
GCAGCTGAGCGCGGGGGCCGCCGTCGGCACGGGTTTCGCCGCCGGTGGCGCCCTGATGGCGGCGGGCGGTACTGCTAGCC
TCGCTGTCCGCGGCGGTGGCGCCGCGCTGTCCGCTACGGCGGCCGCGGCGCGAGGTGGAGCGACCGCCTACAGCATCGGT
GCGGCCGGCCAGTCCGGCATGGCGGGTGTCGCCTCAGGTCTCGGTGGCGTCGCGCGAGCCGCGGGCTCTGCCGCCGTGTC
ACCGCTCGCGAACGCCGTCAGCGGTACGGCCTCAGCCTCCTCCGCCGGTGACGTGCCCGACTGGGCCAAGCGCATGAAGC
GCGGCCAGTCGCTTCGCCATGGCGTCTCCGCCGCCGCCCATGCTGTGCGCTCCGGTGACAGCCATGCCGGCGGCTCCTCC
GTCTCCCTCAATGAGAGCGACCGCTCATGA

Upstream 100 bases:

>100_bases
GGGAGAGACTGCCGCTCAGGACCCCGCCTGCCTGAAGGTCTGGGCGCAGACGCGGGACCGGTTCCTCGGCCGTCCCGCGA
CGACTGAAGGTCGCTGAGCC

Downstream 100 bases:

>100_bases
ACCTCTTCAAGCGACCTGCGACCCATTACGGAACGTCGCCCGAGCCGGTCACGCCCTATCAGAAGGCAGCTCAGGTGTGG
GACGAGCGCATCGGTTCGGC

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Type IV Secretion System Protein; Plasmid Conjugal Transfer Protein; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MNGTGVIDNFLGVFTSYIDSGFGLLGGEVAFIATTLIVIDVTLAALFWSWGADDDVIARLIKKTLFVGVFAYIIGNWNNL
ARIVFESFAGLGLKGSGTAFSVSDLMRPGKVAQTGLDAGRPLLESISDLMGWIAFFENFIQIACLLFAWALVLLSFFILA
VQLFVTLIEFKLTTLAGFVLIPFGLFGKTAFMAERVLGNVVSSGIKVMVLAVIIGIGSTLFGQFTAGFGGQTPTIDDAMA
IVLAALSLLGLGIFGPGIAAGLVSGGPQLSAGAAVGTGFAAGGALMAAGGTASLAVRGGGAALSATAAAARGGATAYSIG
AAGQSGMAGVASGLGGVARAAGSAAVSPLANAVSGTASASSAGDVPDWAKRMKRGQSLRHGVSAAAHAVRSGDSHAGGSS
VSLNESDRS

Sequences:

>Translated_409_residues
MNGTGVIDNFLGVFTSYIDSGFGLLGGEVAFIATTLIVIDVTLAALFWSWGADDDVIARLIKKTLFVGVFAYIIGNWNNL
ARIVFESFAGLGLKGSGTAFSVSDLMRPGKVAQTGLDAGRPLLESISDLMGWIAFFENFIQIACLLFAWALVLLSFFILA
VQLFVTLIEFKLTTLAGFVLIPFGLFGKTAFMAERVLGNVVSSGIKVMVLAVIIGIGSTLFGQFTAGFGGQTPTIDDAMA
IVLAALSLLGLGIFGPGIAAGLVSGGPQLSAGAAVGTGFAAGGALMAAGGTASLAVRGGGAALSATAAAARGGATAYSIG
AAGQSGMAGVASGLGGVARAAGSAAVSPLANAVSGTASASSAGDVPDWAKRMKRGQSLRHGVSAAAHAVRSGDSHAGGSS
VSLNESDRS
>Mature_409_residues
MNGTGVIDNFLGVFTSYIDSGFGLLGGEVAFIATTLIVIDVTLAALFWSWGADDDVIARLIKKTLFVGVFAYIIGNWNNL
ARIVFESFAGLGLKGSGTAFSVSDLMRPGKVAQTGLDAGRPLLESISDLMGWIAFFENFIQIACLLFAWALVLLSFFILA
VQLFVTLIEFKLTTLAGFVLIPFGLFGKTAFMAERVLGNVVSSGIKVMVLAVIIGIGSTLFGQFTAGFGGQTPTIDDAMA
IVLAALSLLGLGIFGPGIAAGLVSGGPQLSAGAAVGTGFAAGGALMAAGGTASLAVRGGGAALSATAAAARGGATAYSIG
AAGQSGMAGVASGLGGVARAAGSAAVSPLANAVSGTASASSAGDVPDWAKRMKRGQSLRHGVSAAAHAVRSGDSHAGGSS
VSLNESDRS

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40858; Mature: 40858

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA