Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158425477

Identifier: 158425477

GI number: 158425477

Start: 4406514

End: 4406936

Strand: Direct

Name: 158425477

Synonym: AZC_3853

Alternate gene names: NA

Gene position: 4406514-4406936 (Clockwise)

Preceding gene: 158425476

Following gene: 158425478

Centisome position: 82.06

GC content: 57.21

Gene sequence:

>423_bases
GTGATCGTATTCGGGATCATCAAGCGCAACGGCCTGGTGAAGGCAGAGCCAATCCCGGCCCATGACCGCGCCTCGATCAT
GCAGGTGATCCAGGCACAGAGCCGCGAGGGCTCGCTCTACTACACGGACGAGTGGCAGACCTATGCCACGCTGCGTTTGC
GGGGCGACCATGTGGTGATCCGCAAGGAGAAGGGACGGCCGGTCGGACGCTACCACATCAACGGGATCGAGGGGTTCTGG
TCCTATGCGAAGAACTGGCTCTATCCGTATCGCGGCGTGCCGAAAAATTTCTTCCATCTCTATCTGGGTGAAACCTGTTA
TCGGTTCAATCACCGGGACGAGGATTTGAAGCCGTTGATTATCAAGCTTTTGAAGAGCACGGCGCTGGACCGGATCCAGC
AGAATCTGGTCCAGCTTGATTAG

Upstream 100 bases:

>100_bases
GGAGCATCTGCGCGAGCCGTTCGACGGCAGCCTGGAATGCGATGAAACCACGTTCGGCGGCGCCCGCAAGGGCAAGCGGG
GCTGGGGCGCAGCCGGCAAG

Downstream 100 bases:

>100_bases
GCATTACCTAAGAAAAAGCCGCGCTCATCTTCGGAGCGGCCTCCCGATGAAGTTCGGGTTCGTCGATGAGCATCGCGCTG
TGTGGCCGGTTCGGTGATGT

Product: transposase

Products: NA

Alternate protein names: Transposase For IS; Transposase-Like Protein

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIVFGIIKRNGLVKAEPIPAHDRASIMQVIQAQSREGSLYYTDEWQTYATLRLRGDHVVIRKEKGRPVGRYHINGIEGFW
SYAKNWLYPYRGVPKNFFHLYLGETCYRFNHRDEDLKPLIIKLLKSTALDRIQQNLVQLD

Sequences:

>Translated_140_residues
MIVFGIIKRNGLVKAEPIPAHDRASIMQVIQAQSREGSLYYTDEWQTYATLRLRGDHVVIRKEKGRPVGRYHINGIEGFW
SYAKNWLYPYRGVPKNFFHLYLGETCYRFNHRDEDLKPLIIKLLKSTALDRIQQNLVQLD
>Mature_140_residues
MIVFGIIKRNGLVKAEPIPAHDRASIMQVIQAQSREGSLYYTDEWQTYATLRLRGDHVVIRKEKGRPVGRYHINGIEGFW
SYAKNWLYPYRGVPKNFFHLYLGETCYRFNHRDEDLKPLIIKLLKSTALDRIQQNLVQLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16478; Mature: 16478

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFGIIKRNGLVKAEPIPAHDRASIMQVIQAQSREGSLYYTDEWQTYATLRLRGDHVVI
CEEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCEEEE
RKEKGRPVGRYHINGIEGFWSYAKNWLYPYRGVPKNFFHLYLGETCYRFNHRDEDLKPLI
ECCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHEECCCCCCCHHHHH
IKLLKSTALDRIQQNLVQLD
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVFGIIKRNGLVKAEPIPAHDRASIMQVIQAQSREGSLYYTDEWQTYATLRLRGDHVVI
CEEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCEEEE
RKEKGRPVGRYHINGIEGFWSYAKNWLYPYRGVPKNFFHLYLGETCYRFNHRDEDLKPLI
ECCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHEECCCCCCCHHHHH
IKLLKSTALDRIQQNLVQLD
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA