| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425448
Identifier: 158425448
GI number: 158425448
Start: 4376790
End: 4377257
Strand: Direct
Name: 158425448
Synonym: AZC_3824
Alternate gene names: NA
Gene position: 4376790-4377257 (Clockwise)
Preceding gene: 158425447
Following gene: 158425449
Centisome position: 81.51
GC content: 66.24
Gene sequence:
>468_bases ATGTGGACAGCAGACCAGCGGGGCCGGATGGCCAGGATCGCCCGGAAGACGAAACGCTATCCCTCGGACCTGACGGATGA AGTATGGGACCGGATGGCGCCGTTGATGCCGGCTCCCGGACGCCGGGGGCGGCCCCGCGAGGTGGAGTTTCGGGAAGTCA TCAATGCGGTGCGCTATCTGGTGCGGTCAGGCGGCGGCTGGCGGATGCTGCCGATCCATTTCGGTCACTGGCGCACCGTC TACGGCTGGTTCCGGGAACTGGCGCGCCGGTTCCTATTCCAGACCATCCACGATGTCGAACTGATTCTGGACCGCGAGCG GGCGGGGCGTGAAGCGAGCCCGAAGGGGGCGGTGATCGACAGTCAGACAATCAAGGCGCCGCAAGCCGAAGCCAGGGGCT ACGACGCCGGCAAGAAGATCATCAGGCGCAAGCGCCACATCGCGGTCGACACGACGGGCGGCTCCTGA
Upstream 100 bases:
>100_bases AGAAGCTGAAAGAAGCTGCGTCGGGAAACTTCTAAGAGCCCGTTTGGAAATTCGTGATCCGGGGATTCCTCTTTGTCCGT GCTTATGATTCAAGCTGTGG
Downstream 100 bases:
>100_bases TGGTCCATCTGACGAGCGCGGACATCTCCGACAGCGCCGGCGCACAGATGATGCTCGATGCGATCCGCAAGCGCTGGCCG TGGGTGAAGCACCTCTTCGC
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Transposase Of; Transposase And Inactivated Derivatives-Like; Transposase Protein; Family Transposase; Transposase Is4 Family Protein; Transposon; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Transposase Fragment
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MWTADQRGRMARIARKTKRYPSDLTDEVWDRMAPLMPAPGRRGRPREVEFREVINAVRYLVRSGGGWRMLPIHFGHWRTV YGWFRELARRFLFQTIHDVELILDRERAGREASPKGAVIDSQTIKAPQAEARGYDAGKKIIRRKRHIAVDTTGGS
Sequences:
>Translated_155_residues MWTADQRGRMARIARKTKRYPSDLTDEVWDRMAPLMPAPGRRGRPREVEFREVINAVRYLVRSGGGWRMLPIHFGHWRTV YGWFRELARRFLFQTIHDVELILDRERAGREASPKGAVIDSQTIKAPQAEARGYDAGKKIIRRKRHIAVDTTGGS >Mature_155_residues MWTADQRGRMARIARKTKRYPSDLTDEVWDRMAPLMPAPGRRGRPREVEFREVINAVRYLVRSGGGWRMLPIHFGHWRTV YGWFRELARRFLFQTIHDVELILDRERAGREASPKGAVIDSQTIKAPQAEARGYDAGKKIIRRKRHIAVDTTGGS
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17984; Mature: 17984
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTADQRGRMARIARKTKRYPSDLTDEVWDRMAPLMPAPGRRGRPREVEFREVINAVRYL CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH VRSGGGWRMLPIHFGHWRTVYGWFRELARRFLFQTIHDVELILDRERAGREASPKGAVID HHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC SQTIKAPQAEARGYDAGKKIIRRKRHIAVDTTGGS CCCCCCCCHHHCCCHHHHHHHHHHHHEEEECCCCC >Mature Secondary Structure MWTADQRGRMARIARKTKRYPSDLTDEVWDRMAPLMPAPGRRGRPREVEFREVINAVRYL CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH VRSGGGWRMLPIHFGHWRTVYGWFRELARRFLFQTIHDVELILDRERAGREASPKGAVID HHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC SQTIKAPQAEARGYDAGKKIIRRKRHIAVDTTGGS CCCCCCCCHHHCCCHHHHHHHHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA