Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158425444

Identifier: 158425444

GI number: 158425444

Start: 4372932

End: 4373597

Strand: Direct

Name: 158425444

Synonym: AZC_3820

Alternate gene names: NA

Gene position: 4372932-4373597 (Clockwise)

Preceding gene: 158425427

Following gene: 158425447

Centisome position: 81.44

GC content: 65.47

Gene sequence:

>666_bases
GTGCGGGGCGGTCATAGTAGACCTGAAGGAGGCTTCCGATGGCACGACGCAAGTCGCCCGGCCTTTCTGGTGCGCTTCTG
GACCATCTTCTTGGCGGCGCGGGTCCCAAGACGGCCATTGACGCCAATGGCTTCTCGACGATCTGAAGAAGGCTCTGGCC
GAGCGGCCCTGAACGCCGAGATGGATCATCATCTGGCGGGCGACGAAGCCGACAACAGCCGCAACGGATATGGCCGCAAG
GCGGTGACGACCGAGATCGGCCGGATCGAGCTGGACATCCCGCGCGACCGGCAGGCAACCTTCGATCCGCAGCTGATCGC
CAAGTACCAGCGGCGCTTCCCAGGGTTCGACGACAGGATCGCGTCCATGTATGCCCGCGGCATGAGCGCCTGCGAGATCG
TCGGGCATTTGCGCGAGCTCTACGGCATCGAGGCCTCGCCTGATCTCGTCAGCGCCGTCACGGATCCCGTGCTGGAGGAG
ATTGCCGCCTGGCAGGCGCGGCCGCTGGAGCCGGCCTATCCCCAGGTGTTCTTCGATGCCTGTGCGTCAAGGTCCGCGAC
GAGGGCATCGTGCGCTCACCAAGGCTGTCCATATCGCGCTCGGCGTCCGCGCCGATGGGACCAAGGAGATCCTGGGCCTC
TGGCTGGAGCAGAACGAGGGCGCTAA

Upstream 100 bases:

>100_bases
ACCCTGATCTCGGGTCAGCGACCGACGCAGATCCGGCGGCAGGGTTGCGATGGCTCGGGTGATCGCGTTGCGCTCCGCCT
GAGACTGCCAGGAATTTCGT

Downstream 100 bases:

>100_bases
GTTCTGGCTGCGGGTCTGAACGAACTCAGGAACCACGGCACCGAGGACATCCTGCTGGTCGTCGTCGATGGCCTGAAGGG
CTTCCCGGACGAGATACGCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRGGHSRPEGGFRWHDASRPAFLVRFWTIFLAARVPRRPLTPMASRRSEEGSGRAALNAEMDHHLAGDEADNSRNGYGRK
AVTTEIGRIELDIPRDRQATFDPQLIAKYQRRFPGFDDRIASMYARGMSACEIVGHLRELYGIEASPDLVSAVTDPVLEE
IAAWQARPLEPAYPQVFFDACASRSATRASCAHQGCPYRARRPRRWDQGDPGPLAGAERGR

Sequences:

>Translated_221_residues
MRGGHSRPEGGFRWHDASRPAFLVRFWTIFLAARVPRRPLTPMASRRSEEGSGRAALNAEMDHHLAGDEADNSRNGYGRK
AVTTEIGRIELDIPRDRQATFDPQLIAKYQRRFPGFDDRIASMYARGMSACEIVGHLRELYGIEASPDLVSAVTDPVLEE
IAAWQARPLEPAYPQVFFDACASRSATRASCAHQGCPYRARRPRRWDQGDPGPLAGAERGR
>Mature_221_residues
MRGGHSRPEGGFRWHDASRPAFLVRFWTIFLAARVPRRPLTPMASRRSEEGSGRAALNAEMDHHLAGDEADNSRNGYGRK
AVTTEIGRIELDIPRDRQATFDPQLIAKYQRRFPGFDDRIASMYARGMSACEIVGHLRELYGIEASPDLVSAVTDPVLEE
IAAWQARPLEPAYPQVFFDACASRSATRASCAHQGCPYRARRPRRWDQGDPGPLAGAERGR

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 24704; Mature: 24704

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGHSRPEGGFRWHDASRPAFLVRFWTIFLAARVPRRPLTPMASRRSEEGSGRAALNAE
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEECCC
MDHHLAGDEADNSRNGYGRKAVTTEIGRIELDIPRDRQATFDPQLIAKYQRRFPGFDDRI
HHHHCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHH
ASMYARGMSACEIVGHLRELYGIEASPDLVSAVTDPVLEEIAAWQARPLEPAYPQVFFDA
HHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
CASRSATRASCAHQGCPYRARRPRRWDQGDPGPLAGAERGR
HHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGGHSRPEGGFRWHDASRPAFLVRFWTIFLAARVPRRPLTPMASRRSEEGSGRAALNAE
CCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEECCC
MDHHLAGDEADNSRNGYGRKAVTTEIGRIELDIPRDRQATFDPQLIAKYQRRFPGFDDRI
HHHHCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHH
ASMYARGMSACEIVGHLRELYGIEASPDLVSAVTDPVLEEIAAWQARPLEPAYPQVFFDA
HHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
CASRSATRASCAHQGCPYRARRPRRWDQGDPGPLAGAERGR
HHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]