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The map label for this gene is noeC

Identifier: 158425434

GI number: 158425434

Start: 4363874

End: 4364797

Strand: Reverse

Name: noeC

Synonym: AZC_3810

Alternate gene names: 158425434

Gene position: 4364797-4363874 (Counterclockwise)

Preceding gene: 158425435

Following gene: 158425433

Centisome position: 81.28

GC content: 54.44

Gene sequence:

>924_bases
ATGTGGAATAAGGAATGGGCCGCCAAAATACCGTTTATGACGTACTGCGAGGCGTGCCGACCGCATCACTGGTTGAAGAA
TGGTCTGTTGTTCGTCCCCGTCCTTATATGCGGGCGGGCAGAAGACCTGCTGCAGGCTCCTCTTTGGCTCGCGTTCATGA
CTTTTTGCTCTGTAGCGTCCGGCATTTACGTTCTAAACGACCTCATGGATCGAGCGCATGACAGACGTCATCCGTCAAAG
CGTCACCGACCATTTGCCTCCCGTAAGTTATCCGGCCTCACCGGGGTGTGGATGTGCCTGGTGTTAATTGCCCTCGGCGG
CGTTTGTGCGATCAACTGCGGTGAGCGCCTTTTTGCGATCACAGCATCGTATGTCGCACTCTCGGTGATCTACGTAGGAA
AGGTGAGAGGCGAGTATGTTCTCGACCTTTTTGTCCTATCAGCGCTTTATACCACGCGGATATTGGCGGGCGCGACCGCG
GCAAACATACCTGTCCCGGCATCCTTTCTTGCATTTTCAGCCATGGCATTTGTATCTTTGGCGTCGATAAAGAGGCTGAA
CGAATTGACGCAACTGCGGCGTGACGGTGCGCCGGACCTATACGGTCGAGGTTACGAATTGTCGGATCATTCGATTGTCG
CGTTGATATGTGTGTCGGCGGGATATGCCGCGGTGGTGTTCTTGGAGCTGTTTGTTCAGATGTCCAGTGTAGCGCAGGGT
CCCGCGCCGATATTTGTATCGAACGCCATGTGCGTGGTGGTTGCGTACTGGATTTCCAGGGCTGTAGTGCAGGCTCATCG
GGGCGATATGCGCAGCGATACTCTCTGCTACGCTGTTACGGATGGCTCCAGCCTAGTGTGCATTCTCGGACTGGCCTTAG
GATTGGTCTTTCTCATGTACTGCCGGTCGCAATCGATTGGTTGA

Upstream 100 bases:

>100_bases
GGTGGTAGGCTAGGGGGTGCTACCGCCAGGGAAGATGGCAGAGTGTCCCGGATAGCGCCCGCGCGATCTTGGCCGCCATG
GATACACGCTAGGTGGATGA

Downstream 100 bases:

>100_bases
GTGAGGGTGTCCGACTGCGCGCTAAGATGCGCGGGGATGCATTTCGAGGAGCTCGTTCGGCGACGGATTGGAGGCGTTGG
ATGATTTTGTCAGGCTGGGG

Product: nodulation protein noeC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MWNKEWAAKIPFMTYCEACRPHHWLKNGLLFVPVLICGRAEDLLQAPLWLAFMTFCSVASGIYVLNDLMDRAHDRRHPSK
RHRPFASRKLSGLTGVWMCLVLIALGGVCAINCGERLFAITASYVALSVIYVGKVRGEYVLDLFVLSALYTTRILAGATA
ANIPVPASFLAFSAMAFVSLASIKRLNELTQLRRDGAPDLYGRGYELSDHSIVALICVSAGYAAVVFLELFVQMSSVAQG
PAPIFVSNAMCVVVAYWISRAVVQAHRGDMRSDTLCYAVTDGSSLVCILGLALGLVFLMYCRSQSIG

Sequences:

>Translated_307_residues
MWNKEWAAKIPFMTYCEACRPHHWLKNGLLFVPVLICGRAEDLLQAPLWLAFMTFCSVASGIYVLNDLMDRAHDRRHPSK
RHRPFASRKLSGLTGVWMCLVLIALGGVCAINCGERLFAITASYVALSVIYVGKVRGEYVLDLFVLSALYTTRILAGATA
ANIPVPASFLAFSAMAFVSLASIKRLNELTQLRRDGAPDLYGRGYELSDHSIVALICVSAGYAAVVFLELFVQMSSVAQG
PAPIFVSNAMCVVVAYWISRAVVQAHRGDMRSDTLCYAVTDGSSLVCILGLALGLVFLMYCRSQSIG
>Mature_307_residues
MWNKEWAAKIPFMTYCEACRPHHWLKNGLLFVPVLICGRAEDLLQAPLWLAFMTFCSVASGIYVLNDLMDRAHDRRHPSK
RHRPFASRKLSGLTGVWMCLVLIALGGVCAINCGERLFAITASYVALSVIYVGKVRGEYVLDLFVLSALYTTRILAGATA
ANIPVPASFLAFSAMAFVSLASIKRLNELTQLRRDGAPDLYGRGYELSDHSIVALICVSAGYAAVVFLELFVQMSSVAQG
PAPIFVSNAMCVVVAYWISRAVVQAHRGDMRSDTLCYAVTDGSSLVCILGLALGLVFLMYCRSQSIG

Specific function: Unknown

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NOEC_AZOC5 (Q43967)

Other databases:

- EMBL:   L18897
- EMBL:   AP009384
- RefSeq:   YP_001526726.1
- GeneID:   5692477
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_3810
- OMA:   RRDEMND
- BioCyc:   ACAU438753:AZC_3810-MONOMER
- GO:   GO:0009877
- InterPro:   IPR000537

Pfam domain/function: PF01040 UbiA

EC number: NA

Molecular weight: Translated: 33590; Mature: 33590

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x21c5b594)-; HASH(0x22c7ce80)-; HASH(0x1c1cf624)-; HASH(0x237f51c0)-; HASH(0x23259758)-; HASH(0x22fbc728)-; HASH(0x23a72cc4)-; HASH(0x2288876c)-;

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNKEWAAKIPFMTYCEACRPHHWLKNGLLFVPVLICGRAEDLLQAPLWLAFMTFCSVAS
CCCCCHHHCCCHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GIYVLNDLMDRAHDRRHPSKRHRPFASRKLSGLTGVWMCLVLIALGGVCAINCGERLFAI
HHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHH
TASYVALSVIYVGKVRGEYVLDLFVLSALYTTRILAGATAANIPVPASFLAFSAMAFVSL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
ASIKRLNELTQLRRDGAPDLYGRGYELSDHSIVALICVSAGYAAVVFLELFVQMSSVAQG
HHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PAPIFVSNAMCVVVAYWISRAVVQAHRGDMRSDTLCYAVTDGSSLVCILGLALGLVFLMY
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
CRSQSIG
HHHCCCH
>Mature Secondary Structure
MWNKEWAAKIPFMTYCEACRPHHWLKNGLLFVPVLICGRAEDLLQAPLWLAFMTFCSVAS
CCCCCHHHCCCHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GIYVLNDLMDRAHDRRHPSKRHRPFASRKLSGLTGVWMCLVLIALGGVCAINCGERLFAI
HHHHHHHHHHHHHHHCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHH
TASYVALSVIYVGKVRGEYVLDLFVLSALYTTRILAGATAANIPVPASFLAFSAMAFVSL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
ASIKRLNELTQLRRDGAPDLYGRGYELSDHSIVALICVSAGYAAVVFLELFVQMSSVAQG
HHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PAPIFVSNAMCVVVAYWISRAVVQAHRGDMRSDTLCYAVTDGSSLVCILGLALGLVFLMY
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
CRSQSIG
HHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA